Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3205 ATGCCGAATCAAAGGTTGGAGGGTAAGGTGGCTCTTATCACTGGGGCAGCTAGTGGGATTGGTGAAGAGACAGTGAGACTATTTGCTGCAAATGGAGCCTTCATCGTTGCTGCAGACATTCAAGACGATCTTGGTCGCCAACTTGAAGCTTCAATAGGCTCAGATAGAGTCACTTACCACCATTGTGATGTGAGAGATGAGACTCAAGTTGAAGAAACAGTTCAATTCACATTGGAAAAACATGGTCGCATTGACATCCTTTTCAGCAATGCTGGCATACTAGACTCTTTATCTGGGATCCTTGACCTTGATCTGAATGAATTTGACAACATCATGGCCACAAATGTTCGTGGTGCGGCTGCCACAATCAAGCACGCTGCACGTGCCATGGTTGCTAAGAGCACCCGTGGATCCATCATATGCACCACTAGTGTTGCTGCCACTGTTGCTGGAACTGGTCCTCATGGCTACACCACTTCAAAGCATGCTCTTGTGGGGCTTGTGAAGTCAGCTTGTAGTGAGCTTGGGGCACATGGGATCAGAGTTAATAGTGTGTCCCCTTTTGGGGTTGCCACACCTCTTGCATGTAGAGCTTTCCATCTTGAACCTGATGAAGTTGAAGCTAATACCTATGCACAGGCTAATCTGAAGGGGGTTGTGTTGAAGGCTCGGCATATTGCAGAAGCTGTTATGTACCTTGCTTCTGATGAAGCTCTTTACATCAGTGGTCACAACTTGGTGGTTGATGGTGGCTTCTCCGTGGTTAATCGCACTTCTTCTTCAAAACCTATGTAA 795 0.4692 MPNQRLEGKVALITGAASGIGEETVRLFAANGAFIVAADIQDDLGRQLEASIGSDRVTYHHCDVRDETQVEETVQFTLEKHGRIDILFSNAGILDSLSGILDLDLNEFDNIMATNVRGAAATIKHAARAMVAKSTRGSIICTTSVAATVAGTGPHGYTTSKHALVGLVKSACSELGAHGIRVNSVSPFGVATPLACRAFHLEPDEVEANTYAQANLKGVVLKARHIAEAVMYLASDEALYISGHNLVVDGGFSVVNRTSSSKPM* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3205 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 IPR002347 -
Dod01g3205 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Dod01g3205 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 IPR002347 -
Dod01g3205 264 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 3B 3 260 - -
Dod01g3205 264 Pfam Enoyl-(Acyl carrier protein) reductase 15 253 - -
Dod01g3205 264 Gene3D - 1 260 - -
Dod01g3205 264 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 3 260 - -
Dod01g3205 264 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Dod01g3205 264 PRINTS Glucose/ribitol dehydrogenase family signature 157 176 IPR002347 -
Dod01g3205 264 PRINTS Glucose/ribitol dehydrogenase family signature 216 236 IPR002347 -
Dod01g3205 264 PRINTS Glucose/ribitol dehydrogenase family signature 131 147 IPR002347 -
Dod01g3205 264 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Dod01g3205 264 PRINTS Glucose/ribitol dehydrogenase family signature 178 195 IPR002347 -
Dod01g3205 264 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 255 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3205 Dod-Chr1 72966220 72967419 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3205 2 251 Acyl Lipid Metabolism Gene Families AT3G55290 31.716 9.75e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3205 - - gmx:100811279 430.639