Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3204 ATGTCTAAGCAAAGGTTGGAGGGTAAGGTGGCAATTGTGACCGGAGCAGCAAGTGGAATAGGAGCAGAGGCAGAGAGGATATTCGCGGAAAACGGGGCATTCGTAGTTATAGCAGATGTTGAAGACGAAAAAGGTCACAGGGTTGCAAGTTCCATTGGCTTAGACAAGGTGAGTTACCACCATTGCGATGTAAGAGACGAGAAACAAGTTGAGCAAACAGTTGCTTTTGCACTGGAGAAATATGGCAGCCTAGACATCATGTTTAGCAATGCCGGAATTGTGGGCTCTTCCTCTAATATACTTGATTATGATCTAAGTGATTTTGACAACACCATAGCCGTGAATCTTCACGGTGCAGCAGCATGTATCAAGCACGCTGCACGTGTCATGGTGGCTAGAAAGACGCGGGGGTCCATAATTTGCACATCCAGTATTGCTGGTTTGGTTGGTGGATTGTCGAGTCTTGGTTACACTGCATCCAAACACGGTCTTATAGGCCTTGCGCGCTCAGCGTGTGGTCATCTCGGAGCTTATGGGATTAGAGTTAATTCCATCTCACCCTATGTGGTAGGTACACCTCTAACATGTAGAACGGTGGAGATGGAAGCAAGTGAAGTTGAAACTCTTAGCGTTGCTACTGGCAATTTGAAGGGGATTACATTGAAGGCAACCCATATTGCAGAAGCAGCTTTGTTTCTTGCTTCTAATGAATCGGCTTATATTAGTGGACACAACTTGGTGGTGGATGGAGGTTTCATGGCCTTCAATCGCTCTCTTGATGCCTTCTTCACGTCAAAAGATAAATAA 807 0.4572 MSKQRLEGKVAIVTGAASGIGAEAERIFAENGAFVVIADVEDEKGHRVASSIGLDKVSYHHCDVRDEKQVEQTVAFALEKYGSLDIMFSNAGIVGSSSNILDYDLSDFDNTIAVNLHGAAACIKHAARVMVARKTRGSIICTSSIAGLVGGLSSLGYTASKHGLIGLARSACGHLGAYGIRVNSISPYVVGTPLTCRTVEMEASEVETLSVATGNLKGITLKATHIAEAALFLASNESAYISGHNLVVDGGFMAFNRSLDAFFTSKDK* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3204 268 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 254 IPR036291 -
Dod01g3204 268 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 1 261 - -
Dod01g3204 268 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 144 172 IPR020904 GO:0016491
Dod01g3204 268 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Dod01g3204 268 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 IPR002347 -
Dod01g3204 268 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 IPR002347 -
Dod01g3204 268 Gene3D - 1 265 - -
Dod01g3204 268 Pfam Enoyl-(Acyl carrier protein) reductase 15 252 - -
Dod01g3204 268 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Dod01g3204 268 PRINTS Glucose/ribitol dehydrogenase family signature 131 147 IPR002347 -
Dod01g3204 268 PRINTS Glucose/ribitol dehydrogenase family signature 178 195 IPR002347 -
Dod01g3204 268 PRINTS Glucose/ribitol dehydrogenase family signature 216 236 IPR002347 -
Dod01g3204 268 PRINTS Glucose/ribitol dehydrogenase family signature 157 176 IPR002347 -
Dod01g3204 268 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Dod01g3204 268 PANTHER OXIDOREDUCTASE-RELATED 1 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3204 Dod-Chr1 72952508 72954043 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3204 6 251 Acyl Lipid Metabolism Gene Families AT3G55290 31.008 1.02e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3204 - - gmx:100798299 377.481