Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3194 ATGCATCCTCCACCGATGGATCAAGTCCCAAGGACACGTGGACAACACAGATACGAAGATCGTCCCAAGTTGCATGATCAAATATATAGCCACAATTTCGTCAAAGTCACAAGATCACCACCACCACCTCCTCCTCCCACTCTATATATACACACCAACCCACCCTCCCATTCTGTCCAGAATCAGAAACACAGCATAGTCACCACCAACCTTCACAAACACTCCTCTCTTCTGCAGCATTCTCTCTCTTTTTCCTCCTCCTCGTACTTAGCTCTTGTCTGTTACCACCAACAGCTAGAACAACCCCCCCCCCCCCAAAAAAAAAAAAAAAAAAACAACAACACACACACACACACACAAACTCTGACCATGGCTCCCGAGCTCGTCCCAACCGCTGGTAGCGCGTTTACCAAGGCGGCTACACTGCCGAGGCGTGCCTATGTTACGTTCCTTGCCGGTAATGGTGACTATGTGAAAGGTGTTGTTGGGTTGGCCAAGGGGTTACGGAAGGTGAAGACAGCGTACCCTCTTGTGGTGGCGGTGCTCCCTGACGTGCCGGAGGAGCACCGTCGGATCCTGGAGTCTCAGGGATGCATCATCCGTGAGATAGAACCCGTTTACCCGCCCGAGAACCAGACCCGGTTCGCCATGGCCTATTACGTCATCAACTACTCCAAGCTCCGTATCTGGGAGTTTGTGGAATACAGCAAGATGATCTATTTGGACGGTGACATTCAAGTCTATGAAAACATTGATCACCTGTTTGATCTTCCCGATGGTTACTTTTATGCTGTGATGGACTGCTTCTGCGAGAAGACTTGGAGTCACACCCCGCAGTACAAGGTTGGGTACTGCCAGCAGTGCGCGGACAAGGTGCAGTGGCCCAAGGAATTGGGTCAGCCCCCATCCCTTTACTTCAATGCTGGCATGTTCGTGTTTGAGCCAAGCATTGAGACTTACCGCGACCTGCTCAAGACCCTTCAGGTCACCCCTCCTACACCATTTGCGGAACAGGATTTCCTCAACATGTACTTCAAGGACATTTACAAGCCAATTCCCTTGGTATACAACCTTGTGCTTGCCATGCTGTGGCGCCACCCCGAGAATGTTGACCTTGATAGAGTCAAGGTTGTTCACTACTGTGCAGCGGGATCTAAGCCGTGGAGGTATACGGGGAAGGAAGAGAATATGCAGAGGGGGACATAA 1206 0.5091 MHPPPMDQVPRTRGQHRYEDRPKLHDQIYSHNFVKVTRSPPPPPPPTLYIHTNPPSHSVQNQKHSIVTTNLHKHSSLLQHSLSFSSSSYLALVCYHQQLEQPPPPQKKKKKNNNTHTHTQTLTMAPELVPTAGSAFTKAATLPRRAYVTFLAGNGDYVKGVVGLAKGLRKVKTAYPLVVAVLPDVPEEHRRILESQGCIIREIEPVYPPENQTRFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVYENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKVGYCQQCADKVQWPKELGQPPSLYFNAGMFVFEPSIETYRDLLKTLQVTPPTPFAEQDFLNMYFKDIYKPIPLVYNLVLAMLWRHPENVDLDRVKVVHYCAAGSKPWRYTGKEENMQRGT* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3194 401 PANTHER GLYCOGENIN SUBFAMILY MEMBER 124 399 - -
Dod01g3194 401 CDD GT8_Glycogenin 145 397 - -
Dod01g3194 401 PANTHER GALACTINOL SYNTHASE 1 124 399 - -
Dod01g3194 401 SUPERFAMILY Nucleotide-diphospho-sugar transferases 147 392 IPR029044 -
Dod01g3194 401 MobiDBLite consensus disorder prediction 1 22 - -
Dod01g3194 401 Pfam Glycosyl transferase family 8 149 391 IPR002495 GO:0016757
Dod01g3194 401 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 143 400 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3194 Dod-Chr1 72816718 72819558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3194 124 399 Glycosyltransferase AT1G56600 76.895 7.86e-164 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3194 K18819 - pop:7455409 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3194 01 72816718 72819558 Dod01g3194 01 72816718 72819558 ECH