Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3188 ATGAATATGGATGCGAAGGATATACTGGGATTGCCAAAGAACTCATTCCCAGCTCTGGAGAAGAAGTCTCGGCCTCACAAAGAGTCTCAGAGAAAACCAGATGGAATATCCCGCGAGGTGTATGCGCTAACTGGTGGAGTGCCACCTCTTATGCCTGCCGTTGATGCTTCTCAATTGAAGAAGAGACCTCCCTCTCACGAAAAGATCACTTGGCAATGGCTTCCTTTCACGAATTCTGCTCGTAAAGATAATCTTCAACTTTACCATTGGGTTCGAGTTGTCAATGGTGTTCCACCTACTGGGGACTATTCTTTTGCTAAGTATAACAAGTCTGTTGATGTTATCAAATACACGGACGAGGAGTATGACAAGTATTTGAAGGATCCATTATGGACCAAGGAGGAGACGGATCAACTATTTGACTTGTGCGAGAGGTTTGATCTCCGATTTATCATTATAGCTGATAGGTTTCCAACATCCCGTACGGTGGAGGAATTAAAGGATCGATATTATAGTGTATCCCGGGCTATATTAATTGCTAGAGCTCCATCTTCTGGGGACCTCGCAGCAAATCCTCTTGTAAAGGACCCATATAATGTTTCACAAGAGATGGAACGAAAACGAGCATTGTCCATGGTTCTCTCTCAAACAAGGCAACAAGAGCGAAAAGATGAAGAGGTTCTTGTTGAAGCAAAAAGAATAGCTGAGTTACGCTTGCCTGCTAAGGTTGCTGAGGAGACTCAGTTGGTTGCTGCTTCAAATGCTGGTGCGGAAGTTACAGGGAGGGCCACCCCCGGTGAAAATGTATCTCCATCAAATGTGCAACTTCCATCAACCCCATTAACTGATAATGCATCTACTCTAGCTTCTCTTCGCATACTCCCAGTATATTTGAGAACATATGCACTTGACCAAATGATGCAAGCTGCAAGTACATCTGCTGGACTTCGGACCATCAAACGAGTTGAGCAAACTTTGCAAGATCTTGGGGTCAATTTGAAACCAAGGGTTCCAACTAAAGCTGTATGTGCAGAGCATCTTGAACTAAGAAAAGAAATACTAACTTTGCTGAATCTTCAGAAACAGGTGCAATATAAAGAGGCTGAAAGTTCATCTTTTCGTGATGGGTCATACAGTGAAACACCAGGCACACCCAAGCATTTGCATCATGATGTGGATCAGGACTGGGCATTTATTCCAGACTCCATGAGTTTTGGAGGGGAAAGGGTTGGCAAAAAAGATCAAAAGCGCAAGGCACATGGAGCTCCATCGTCATCAGCTCATAAAAGACCAAGAAAACAAAAGGCCTCAGATCTTTAG 1320 0.4379 MNMDAKDILGLPKNSFPALEKKSRPHKESQRKPDGISREVYALTGGVPPLMPAVDASQLKKRPPSHEKITWQWLPFTNSARKDNLQLYHWVRVVNGVPPTGDYSFAKYNKSVDVIKYTDEEYDKYLKDPLWTKEETDQLFDLCERFDLRFIIIADRFPTSRTVEELKDRYYSVSRAILIARAPSSGDLAANPLVKDPYNVSQEMERKRALSMVLSQTRQQERKDEEVLVEAKRIAELRLPAKVAEETQLVAASNAGAEVTGRATPGENVSPSNVQLPSTPLTDNASTLASLRILPVYLRTYALDQMMQAASTSAGLRTIKRVEQTLQDLGVNLKPRVPTKAVCAEHLELRKEILTLLNLQKQVQYKEAESSSFRDGSYSETPGTPKHLHHDVDQDWAFIPDSMSFGGERVGKKDQKRKAHGAPSSSAHKRPRKQKASDL* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3188 439 MobiDBLite consensus disorder prediction 265 281 - -
Dod01g3188 439 MobiDBLite consensus disorder prediction 407 421 - -
Dod01g3188 439 MobiDBLite consensus disorder prediction 403 439 - -
Dod01g3188 439 Gene3D - 100 186 - -
Dod01g3188 439 MobiDBLite consensus disorder prediction 1 38 - -
Dod01g3188 439 MobiDBLite consensus disorder prediction 19 35 - -
Dod01g3188 439 SMART sant 127 176 IPR001005 -
Dod01g3188 439 PANTHER BNAA04G26950D PROTEIN 3 439 - -
Dod01g3188 439 SUPERFAMILY Homeodomain-like 127 174 IPR009057 -
Dod01g3188 439 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 3 439 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Dod01g3188 439 MobiDBLite consensus disorder prediction 368 389 - -
Dod01g3188 439 CDD SANT_DMAP1_like 131 173 - -
Dod01g3188 439 MobiDBLite consensus disorder prediction 260 281 - -
Dod01g3188 439 Pfam DNA methyltransferase 1-associated protein 1 (DMAP1) 311 375 IPR008468 GO:0005634|GO:0045892
Dod01g3188 439 Pfam SANT/Myb-like domain of DAMP1 103 177 IPR032563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3188 Dod-Chr1 72725685 72731251 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3188 K11324 - gmx:100818926 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3188 01 72725685 72731251 Dod01g3188 01 72725685 72731251 ECH