Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3185 ATGAGATTGAGTGGTGGTCAAAGGTTGCCTGTTTTTGTGTGTCCGAAGAATAAGAGAAGCTCAACCACAATCCGATTGGCCTCGGTAGCATCCAGCCATAGCAATCCAACCTCTTCTTCTTCTGGGTTGTACTCTGCACAGAAATACGAACTGACGGCGGCAAACGTGGACCTTGTTCTGGAGGATGTTCGGCCTTACCTGATCTCGGACGGTGGGAACGTTGACGTTGTCTCCGTTGAAGATGGCGTTATATCCCTGAGACTCCAAGGAGCGTGCGAGAGTTGTCCCAGCTCTACCACCACCATGAAGATGGGAATCGAGCGCGTCCTCAAGGAGAAATTCGGAGACGCAGTCAAGGACATACAGCAAGTATATGATGCTCATGATCAGCCCAGGGAGACAACGGTTGAGGCGGTGAATAATCATCTTGAGATATTGAGACCGGCCATCAAGAACTACGGGGGCAGTGTGGAAGTGGTGTCCGTGGAAGGCGGGGAGTGCCTTGTTAAATATGTTGGGCCTGACTCCATTGGATCAGGAATCAAAGCTGCCATCAAGGAGAGGTTTCCGGACATCCTCAATGTTACCTTTACCTTCTCCACCTAG 606 0.5083 MRLSGGQRLPVFVCPKNKRSSTTIRLASVASSHSNPTSSSSGLYSAQKYELTAANVDLVLEDVRPYLISDGGNVDVVSVEDGVISLRLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIQQVYDAHDQPRETTVEAVNNHLEILRPAIKNYGGSVEVVSVEGGECLVKYVGPDSIGSGIKAAIKERFPDILNVTFTFST* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3185 201 Gene3D - 134 197 IPR034904 -
Dod01g3185 201 Pfam NifU-like domain 57 116 IPR001075 GO:0005506|GO:0016226|GO:0051536
Dod01g3185 201 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 54 126 IPR034904 -
Dod01g3185 201 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 132 197 IPR034904 -
Dod01g3185 201 PANTHER NIFU-LIKE PROTEIN 1, CHLOROPLASTIC 19 198 - -
Dod01g3185 201 Gene3D - 48 133 IPR034904 -
Dod01g3185 201 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 19 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3185 Dod-Chr1 72714889 72715619 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3185 K22074 - gmx:100527356 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3185 01 72714889 72715619 Dod01g3185 01 72714889 72715619 ECH