Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3175 ATGGCGAATAGACCGGATCCTGATATCGACGACGATTTTCGCGAGCTTTATAAGGAGTACACTGGTCCTCTTGGATCTTCTGCTGCTGCTACCAATACGCAAGAGAGGGAAAAATCGAACAAAAGGTCTCATGCTGGCTCTGACGAGGAGGAGGAGGAACCGCGGGACCCTAATGCCGTTCCAACCGATTTCACCAGCCGGGAAGCCAAGGTTTGGGAGGCTAAGTCGAAGGCTACTGAGAGGAATTGGAAGAAAAGGAAAGAAGAAGAAATGATCTGCAAACTTTGTGGAGAATCAGGGCATTTCACTCAGGGTTGTCCATCTACTCTTGGAGCAAACCGCAAGTCTCAAGATTTCTTTGAAAGGATACCCGCAAGAGACAAAAATGTGAGAGCACTTTTTACGGAGAAGGTTTTAAGCAAGATTGAAAGGGATATTGGCTGCAAAATTAAGATGGACGAGAAATTCATTATTGTTAGTGGTAAGGATAGATTAATTTTGGCTAAAGGTGTTGATGCCGTGCACAAGATTAGAGAGGAGTGTGATCAAAGAGGATCTTCTAGTTCTCACATTACCAGATCAAGGTCACCTGAAAGAAGTCCTGTTAGTGCTCGGTTTCAACGCTCTGAGCCTCAAAGGTCTCATTCTGGACCACGAAATACACCTCAGTTTCAACAAAGGTTTGGTAGGCAAGAGAGGGCTGTTGAAGATCGTGTGCGAGAGGACATTCAAAAGTTTGCACGAGGTTCTCCACAAGCTTATGGGAATAGTGGAGCTAGAGGTCGTTCGAGCCATTCAAGATCTCCAAGACAGCCCCCTTATACAGGGAACTCGTATAATTCGTTTGACGGCCGTAGTCAAAACATGGGTCCTTATAGGAATGAGGGGTGGGATTCTCATAGAAGAGAATCTGCTATCCAACCCAGTCATCAGTTTGATTACAATGCCTCCCACAAGACTTTAGAAGAATTAGAGTTGGAGTATAAGAAGGAGGCAGTAGAGCTAACAAAAAATCGTGACAAAGAAGAAGATGAAGAAAACTTGAAGCATCGTGAGGCTATTAGGGATTTAAGGGAGAACTACATGAGCAAAGTTGCTATGTTGAGGGTCACACACACAAAACAATGGGAAGAATTTCTTCTGCTTGATGCCCACAGGCATCAACAGCAGGCGATCCAACAAATGTCTTCTGGTTATGGGGGTTATAAACAGCCGAATTTTGCTGAATATGATGGCTCCACTGTCAATCCTCACTATGCACCTGTGGAATCGAGGAACAGGTTCCCAGACAGTGTGGATACTTATCCTAATAGGCCTCGCGATAATTTTGGTGAATTTCAGAGGCGTGGAGATTTTCCAAAAGCTTACAACAGATATTAA 1380 0.4442 MANRPDPDIDDDFRELYKEYTGPLGSSAAATNTQEREKSNKRSHAGSDEEEEEPRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFFERIPARDKNVRALFTEKVLSKIERDIGCKIKMDEKFIIVSGKDRLILAKGVDAVHKIREECDQRGSSSSHITRSRSPERSPVSARFQRSEPQRSHSGPRNTPQFQQRFGRQERAVEDRVREDIQKFARGSPQAYGNSGARGRSSHSRSPRQPPYTGNSYNSFDGRSQNMGPYRNEGWDSHRRESAIQPSHQFDYNASHKTLEELELEYKKEAVELTKNRDKEEDEENLKHREAIRDLRENYMSKVAMLRVTHTKQWEEFLLLDAHRHQQQAIQQMSSGYGGYKQPNFAEYDGSTVNPHYAPVESRNRFPDSVDTYPNRPRDNFGEFQRRGDFPKAYNRY* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3175 459 Coils Coil 321 345 - -
Dod01g3175 459 MobiDBLite consensus disorder prediction 256 288 - -
Dod01g3175 459 MobiDBLite consensus disorder prediction 35 51 - -
Dod01g3175 459 SUPERFAMILY Retrovirus zinc finger-like domains 80 112 IPR036875 GO:0003676|GO:0008270
Dod01g3175 459 MobiDBLite consensus disorder prediction 421 447 - -
Dod01g3175 459 PANTHER OS01G0252900 PROTEIN 1 459 - -
Dod01g3175 459 MobiDBLite consensus disorder prediction 181 302 - -
Dod01g3175 459 MobiDBLite consensus disorder prediction 1 18 - -
Dod01g3175 459 MobiDBLite consensus disorder prediction 187 228 - -
Dod01g3175 459 MobiDBLite consensus disorder prediction 230 245 - -
Dod01g3175 459 PANTHER OS01G0252900 PROTEIN 1 459 - -
Dod01g3175 459 MobiDBLite consensus disorder prediction 1 76 - -
Dod01g3175 459 ProSiteProfiles Zinc finger CCHC-type profile. 93 108 IPR001878 GO:0003676|GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3175 - - gmx:100806099 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3175 01 72620911 72624898 Dod01g3175 01 72620911 72624898 ECH