Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3163 ATGGAGGATTTGGATGGTACCCGGTTTGACGGCCTCAGCAATGCTGTTAGGAGGAAGAGGAGTCAGACATCGCGTAGGCCGCGACCTGATTCACAGCCTGTTTCTGAAGGCCATGAGCTGTCTCCCTTGTCGTCAACGCCGCCTTCGGAGGATGCTGGCAAGGCCTCTAGTGATGAGATCGCTGCCTATGATGGTCATGCCAAGAGAAAAGAATTCAGTCTTAACCATTGTGTATCTCAGGCCTCCTCTGCTGCTACTGGAGCTGAAGATGATAAATCCCATAGGAAGAGTAGGAGGGATGGAGGATTCCATGCGTTTTATAATAGTGAGCCTGGTAGGAGTGATTTGTATAACAAACGCTGCAGTGAGGGCGTTCTTGCTCCAGTTAATTGGAAAGGATCTAGCAAATCGAAGGATAGCTCTGAATCAGAATCAAGAAATGCTGATGCATATGGTGGAAGGAATCCTGAGACTATGAGCTTGGGGCAGTTTGGTGTTGCCCAGGATGGATTGGGGAATGAGAACAGGGTTAAAAAGGTTAAACTTAAGGTTGGTGGCGTGACACGTACTATTCAAGCCAATTCTTCATCCAACGGCTCTTCAGGAAACGGACCGACTACAAAGACCTCACGTTCATCAGATGCCTCCAGACCACGCCAAAAGCAACAGAGTCATTCAGACGATAATCATTCTCCATCTGAAAAGAGGGGGAGCTTACAAGGCCTTCCCTGGAAGGATTTCTCTAGGCGTGGTTTTGGTCTTGGGAAGGAGGAATCATTGATGGGGAGGACATCTGGAAAGAACACATCTGGAAAGCAAGGAGACAGATCTGAACCAGTTCGTAAGAGCAAGCGAGTACCAAAAAGACGTGTACTTGATGGGGAATTTGGTGATGATGACGATGAGGATGATGAGATTCGGTATTTGGAAAAGCTGAAAACGTCAAAAGTTTCTGCAGTGTATCGAGATGAAGAAGAATTGGGCAAGAAGCATCGCAAACTCTCTAGTGTATCTCATTTGGAAAATGCTGCCTCATCGAGGTCAGGCAAAGATGGTAAGAAAAGGTCTAGATCTGATAGAGTGTATGAGGACACTGATTATGAGGCTGAAGAGGAGTCGGGTTCTGATGGTGAGCTTGATGACAAGAAAAAGAAAAAACAGAGGAAGGAATCTGTTGATGTATTGATGGACGGTAAGAGGGAAATGACTCTTACAACGCGTCAACGGGCCCTTCAATCAAGCAAGGATGCCTCTGCAACCGGTGCAAGTTTAATCGAGTTTCCCAATGGATTGCCTCCTGCCCCCCCTAGAAAGCAAAAGGAGAAGCTTTCAGAAGTGGAGCAGCAACTGAAGAAAGCTGAGGCTGCTCAAAAGCGTAGAATGCAAGTTGAAAAGGCTGCCAGGGAATCTGAGGCTGAAGCTATCAGAAAAATACTTGGTCAAGACTCCAGTAGGAAGAAGCGAGAAGAGAAAATGAAGAAGCGCCAAGAAGAACTGGCGCAGGAGAAGGCAGCCAATGCAAAAATGCTTGCATCAAGCACCATCAGATATGTGATGGGTCCTACGGGGACAGTTGTGACTTTTCCTGAGGACATGGGGCTCCCTAGCATTTTGAACTCGAAACCCGTCAGTTATCCTCCCCCCCGTGAGAAGTGTGCTGGTCCATCTTGTAACAATCCATATAAGTATCGGGATTCAAAATCAAAGCTTCCTCTTTGCAGTCTCCAATGCTACAAGGCTGTCCAGGAGAAGACAGCGGCTGAATCTAGCGGTTGA 1776 0.4724 MEDLDGTRFDGLSNAVRRKRSQTSRRPRPDSQPVSEGHELSPLSSTPPSEDAGKASSDEIAAYDGHAKRKEFSLNHCVSQASSAATGAEDDKSHRKSRRDGGFHAFYNSEPGRSDLYNKRCSEGVLAPVNWKGSSKSKDSSESESRNADAYGGRNPETMSLGQFGVAQDGLGNENRVKKVKLKVGGVTRTIQANSSSNGSSGNGPTTKTSRSSDASRPRQKQQSHSDDNHSPSEKRGSLQGLPWKDFSRRGFGLGKEESLMGRTSGKNTSGKQGDRSEPVRKSKRVPKRRVLDGEFGDDDDEDDEIRYLEKLKTSKVSAVYRDEEELGKKHRKLSSVSHLENAASSRSGKDGKKRSRSDRVYEDTDYEAEEESGSDGELDDKKKKKQRKESVDVLMDGKREMTLTTRQRALQSSKDASATGASLIEFPNGLPPAPPRKQKEKLSEVEQQLKKAEAAQKRRMQVEKAARESEAEAIRKILGQDSSRKKREEKMKKRQEELAQEKAANAKMLASSTIRYVMGPTGTVVTFPEDMGLPSILNSKPVSYPPPREKCAGPSCNNPYKYRDSKSKLPLCSLQCYKAVQEKTAAESSG* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3163 591 Coils Coil 485 506 - -
Dod01g3163 591 MobiDBLite consensus disorder prediction 1 62 - -
Dod01g3163 591 Coils Coil 446 473 - -
Dod01g3163 591 SMART PAPA_1_2 447 532 IPR006880 GO:0031011
Dod01g3163 591 MobiDBLite consensus disorder prediction 1 15 - -
Dod01g3163 591 MobiDBLite consensus disorder prediction 188 213 - -
Dod01g3163 591 MobiDBLite consensus disorder prediction 37 52 - -
Dod01g3163 591 Pfam HIT zinc finger 548 579 IPR007529 -
Dod01g3163 591 MobiDBLite consensus disorder prediction 306 337 - -
Dod01g3163 591 MobiDBLite consensus disorder prediction 274 295 - -
Dod01g3163 591 MobiDBLite consensus disorder prediction 438 502 - -
Dod01g3163 591 PANTHER INO80 COMPLEX SUBUNIT B 1 587 IPR029523 GO:0006338|GO:0031011
Dod01g3163 591 MobiDBLite consensus disorder prediction 80 506 - -
Dod01g3163 591 MobiDBLite consensus disorder prediction 88 103 - -
Dod01g3163 591 Pfam PAPA-1-like conserved region 447 532 IPR006880 GO:0031011
Dod01g3163 591 MobiDBLite consensus disorder prediction 346 364 - -
Dod01g3163 591 MobiDBLite consensus disorder prediction 214 234 - -
Dod01g3163 591 MobiDBLite consensus disorder prediction 376 404 - -
Dod01g3163 591 MobiDBLite consensus disorder prediction 405 420 - -
Dod01g3163 591 PANTHER HIT ZINC FINGER AND PAPA-1-LIKE DOMAIN-CONTAINING PROTEIN 1 587 - -
Dod01g3163 591 MobiDBLite consensus disorder prediction 539 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3163 Dod-Chr1 72478919 72482268 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3163 - - gmx:100814323 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3163 01 72478919 72482268 Dod01g3163 01 72478919 72482268 ECH