Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3147 ATGGAGAAAAAGGAGCGGAAGATTATGGTGGCTGTGGATGAGAGCCAGGAGAGCATGTATGCGCTGTCCTGGTGCCTCACCAACCTTATTTCTGACACCTCCAACTCCAACGTTAAACTAGTGCTCCTCTATGTCAAGCCACCTCCTTCTGTTCACTACCTCGAAGCTGCAGGGTACGTGTTTTCCAGTGATGTTATCTCAACCGTGGAAAAGTACGGCAAGGATTTGGCTATTTCTGTAATGGAAAGAGCTGGAGCTGTCTGCAGGAAGTTGAACACCAACAATATCAATATGGAAAGAGTAGTTGGGAGTGGAGATGCCAAGGATGTGATATGCAGTGCGGTGAAGAAACTAGAGGCTGATACCTTGGTGATGGGAACCCATGGTTATGGATTCTTCAAGAGGGCACTCCTTGGAAGTGTCAGTGATTATTGTGCTAAGCATGCAAAGTGTCCTGTTGTAATCGTGAAGCATCCATAG 480 0.4688 MEKKERKIMVAVDESQESMYALSWCLTNLISDTSNSNVKLVLLYVKPPPSVHYLEAAGYVFSSDVISTVEKYGKDLAISVMERAGAVCRKLNTNNINMERVVGSGDAKDVICSAVKKLEADTLVMGTHGYGFFKRALLGSVSDYCAKHAKCPVVIVKHP* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3147 159 CDD USP_Like 7 156 - -
Dod01g3147 159 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 2 158 - -
Dod01g3147 159 Pfam Universal stress protein family 6 157 IPR006016 -
Dod01g3147 159 Gene3D HUPs 1 159 IPR014729 -
Dod01g3147 159 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 6 158 - -
Dod01g3147 159 PRINTS Universal stress protein signature 5 23 IPR006015 -
Dod01g3147 159 PRINTS Universal stress protein signature 117 129 IPR006015 -
Dod01g3147 159 PRINTS Universal stress protein signature 135 157 IPR006015 -
Dod01g3147 159 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 2 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3147 Dod-Chr1 72363848 72365311 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3147 - - gmx:100306535 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3147 01 72363848 72365311 Dod01g3147 01 72363848 72365311 ECH
Dod01g3147 01 72363848 72365311 Dod06g1992 06 31337421 31338674 ECH