Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3124 ATGGTGAAAACGATCTCATCTCCTTCCTCTTCCTCCCCAGTGACCATAACGGTCTCTTCTGGAGGCAAAGGAAGTGGAAGCAGAAGCATGGGGCTAACCAGTCCAGTGCCACGCACTTCTGTCTCCAACAACCCCAATTCCCCTCTCAGGTCAAGGAGAGCTTCCGGTGGCAGTGGCGGCGGAAGAAGGTTATCAGGAGGAGGCAGCAACAACTATTGCTCCTCCATGTCCAAAGAAGATGGTGGCGGCATGGAAGAAGAATTCAACTCAGGATATGTATCATACACTGTTCACATTCCTCCCACCCCTGACCGCCAGCCCTTGTCAATTTCACAGACAAGCCTTCCTGAAGATACCAAGAACGTCGGGAAACCCGAAACAAATTACATCTCTGGAACAATTTTCACTGGAGGGTTCAACTCTGTGACCAGAGGGCATGTCATTGAGTGTTCCATGGAACGCGAGGAGCCGCAGAAATCTGGAATGATCTGTGGGATGAAAGGGTGTGATGAGGAAGCGATTCGAGGGAGGTCCAGTGTTGGTGGTGGTCCTTGCGAGTGCGGGTTCAAGATATGCAGAGATTGTTACTTGGAGTGTGGTGGGAATGGAGGAGGGGGCAAGTGCCCTGGTTGCAAAGAGCCTTACAAGTATGTGAGTGATGATGAGGAAGAGGAGGATGATGATGATGATGATGATGATGAGCGGGTTTCAGAGGCTGAAGACCAGGCCTTGCCCTTGCCTTCCATGGCTGAGTTCAAGTTGGATAAGAGGCTCTCTGTTGTGAAATCGTTTAAGGCACAGAACCTTCCTCCTGATTTTGATCACACACGCTGGCTCTTCGAAACAAAGGGAACCTATGGCTATGGAAATGCTGTGTGGCCTAAAGATGGGTATGGAGCTGGATCAGGTGCTAATGGATTTGAACACCCTCCGGATTTTGGGGAGAAAGCTAGAAGACCCTTGACCCGAAAAGTTGGAGTTTCAGCTGCCATTCTCAGTCCATATAGGTTACTTATTCTGGTTCGTCTTGTTGCACTCGGGTTGTTTCTTACATGGAGGATTAGACACCCGAATCGTGAAGCGATGTGGTTGTGGGGAATGTCCATAACTTGTGAGCTATGGTTTGCATTTTCGTGGCTTCTTGATCAGCTACCTAAGCTCTGCCCTGTGAACAGAGTCACTGATCTCTCTGTCCTGAAAGAGCGGTTTGAGTCCCCAAACCTTCGCAATCCAAAAGGGAGGCCTGATCTCCCAGGAATTGATGTTTTTGTCTCCACGGCGGACCCAGAAAAGGAGCCTCCTCTTGTCACCGCAAACACCATTCTCTCTATCCTAGCCGTCGATTATCCAGTGGAAAAGGTTGCTTGTTACTTGTCTGATGATGGTGGAGCTCTGTTGACATTTGAGGCTCTTGCTGAGACTGCTAGCTTTGCCAGAATTTGGGTTCCTTTCTGTAGAAAGCACCAGATAGAGCCTAGAAATCCTGAAGCCTATTTTGGGCAGAAGCGTGATTTTCTCAAGAACAAGGTTCGTTTGGACTTTGTGAGGGAGAGGAGAAGGGTGAAAAGAGAGTATGATGAATTCAAAGTGAGAATAAATTCATTGCCTGAATCCATAAGGAGAAGATCTGATGCTTACAATGCTCATGAGGAGTTACGAGTGAAGAAGAAACAGATGGAAGCAGGTGGCAATGTTTCTGAACCCACTAAGGTTCCTAAGGCAACATGGATGTCCGATGGTTCTCATTGGCCAGGAACTTGGGCTTCAGCAGAACAAGATCACTCAAGAGGGGACCATGCCGGTATAATTCAGGCAATGTTAGCTCCACCAAATGCAGAACCAGAATTTGGTGCAGAAGCAGATGCGGAGAACTTGATTGACACAACAGATGTTGACATTAGGCTGCCTATGCTTGTCTATGTGTCTCGAGAGAAGAGGCCTGGATATGATCACAACAAGAAGGCAGGAGCCATGAATGCTCTTGTTCGCACCAGCGCCATCATGTCCAATGGGCCATTCATTCTGAATCTTGACTGTGATCACTACATCTACAACTCCTTGGCTCTCAGGGAAGGTATGTGTTTTATGCTTGACAGGGGTGGTGATAGAATATGTTATGTTCAATTCCCTCAAAGGTTTGAGGGCATTGACCCCAGTGACCGATATGCAAACCACAACACTGTGTTCTTCGATGTGAGCATGAGAGCCCTTGATGGCTTACAAGGTCCAATGTATGTGGGAACTGGCTGCATATTCAGAAGAACAGCTCTCTATGGGTTTAGTCCTCCTAGAGCTACAGAACATCATGGTTGGTTTGGCAGGAAGAAAATTAAGCTGTTTCTGAGAAAGCCTAAGAAGTCCAAAAAGGAAGAAGATGAAGTTGCTGTGCCAATCAATGGTGAGCATCACAATGATGATGATGCTGATATTGAGTCCTTGCTTCTTCCCAAGAGGTTTGGGAACTCTACTTCTCTGGCTGCATCCATCCCAATAGCAGAATACCAGGGAAGGTTGCTTCAAGATTTGCAAGGAAAGGGGGGAACACATGGAAGGCCAGCAGGTTCTCTCGCTGTGCCTCGTGAGCCATTGGATGCTGCTACTGTTGCAGAGGCAATTAGTGTCATATCTTGCTTCTATGAGGACAGAACTGAGTGGGGAAAACGAGTTGGGTGGATATATGGCTCTGTTACAGAAGATGTGGTGACTGGTTACAGAATGCACAATAGAGGGTGGAGATCAGTGTATTGTGTGACCAAGAGGGATGCTTTTAGAGGATCAGCTCCAATCAATCTAACAGACAGGCTCCACCAAGTGCTTAGGTGGGCAACAGGATCTGTTGAGATCTTCTTCTCAAGGAACAATGCACTATTGGCAAGTCCTAGAATGAAGTTCTTGCAAAGGGTGGCATACTTCAATGTGGGAATGTACCCTTTCACTTCAATGTTTCTGATTGTCTATTGCTTCCTGCCTGCAATTTCCCTATTTTCAGGAAAGTTTATTGTCCAGTCCCTGAGCGCAACTTTTCTAGTTTTCTTGCTTGGCATCACCATCACATTGTGCTTGCTTGCATTGCTTGAGATCAAGTGGTCAGGAATCACTCTACATGATTGGTGGCGAAATGAACAGTTCTGGTTGATTGGTGGAACAAGTGCCCACCCTGCTGCTGTGTTACAAGGATTGTTGAAGGTCATAGCTGGAGTAGACATCTCATTCACCCTGACTTCAAAGTCTGCCACCCCAGAAGAAGGAGATGATGAGTTTGCAGATCTTTATGTGGTAAAGTGGAGCTTTCTAATGATCCCTCCAATTACAATTATGATGGTGAACATGATTGCTATTGCTGTGGGAGTGGCCAGGACTATCTACAGTCCTTTTCCACAATGGAGCAAACTAGTAGGAGGGGTGTTCTTCAGTTTCTGGGTTCTGTGCCATCTTTACCCCTTTGCAAAGGGCCTGATGGGAAGGAGAGGGAGGATCCCAACCATTATCTATGTTTGGTCTGGATTGCTCTCAATTATTATCTCTTTGCTTTGGGTGTACATAACCCCTCCTTCTGGAGCACAACAAGATTACATGAATTTCCAGTTCCCTTAG 3594 0.4694 MVKTISSPSSSSPVTITVSSGGKGSGSRSMGLTSPVPRTSVSNNPNSPLRSRRASGGSGGGRRLSGGGSNNYCSSMSKEDGGGMEEEFNSGYVSYTVHIPPTPDRQPLSISQTSLPEDTKNVGKPETNYISGTIFTGGFNSVTRGHVIECSMEREEPQKSGMICGMKGCDEEAIRGRSSVGGGPCECGFKICRDCYLECGGNGGGGKCPGCKEPYKYVSDDEEEEDDDDDDDDERVSEAEDQALPLPSMAEFKLDKRLSVVKSFKAQNLPPDFDHTRWLFETKGTYGYGNAVWPKDGYGAGSGANGFEHPPDFGEKARRPLTRKVGVSAAILSPYRLLILVRLVALGLFLTWRIRHPNREAMWLWGMSITCELWFAFSWLLDQLPKLCPVNRVTDLSVLKERFESPNLRNPKGRPDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKVACYLSDDGGALLTFEALAETASFARIWVPFCRKHQIEPRNPEAYFGQKRDFLKNKVRLDFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELRVKKKQMEAGGNVSEPTKVPKATWMSDGSHWPGTWASAEQDHSRGDHAGIIQAMLAPPNAEPEFGAEADAENLIDTTDVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLALREGMCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTGCIFRRTALYGFSPPRATEHHGWFGRKKIKLFLRKPKKSKKEEDEVAVPINGEHHNDDDADIESLLLPKRFGNSTSLAASIPIAEYQGRLLQDLQGKGGTHGRPAGSLAVPREPLDAATVAEAISVISCFYEDRTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNALLASPRMKFLQRVAYFNVGMYPFTSMFLIVYCFLPAISLFSGKFIVQSLSATFLVFLLGITITLCLLALLEIKWSGITLHDWWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEEGDDEFADLYVVKWSFLMIPPITIMMVNMIAIAVGVARTIYSPFPQWSKLVGGVFFSFWVLCHLYPFAKGLMGRRGRIPTIIYVWSGLLSIIISLLWVYITPPSGAQQDYMNFQFP* 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3124 1197 SUPERFAMILY Nucleotide-diphospho-sugar transferases 435 991 IPR029044 -
Dod01g3124 1197 Pfam Cellulose synthase 420 1189 IPR005150 GO:0016020|GO:0016760|GO:0030244
Dod01g3124 1197 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 121 1194 - -
Dod01g3124 1197 MobiDBLite consensus disorder prediction 219 238 - -
Dod01g3124 1197 MobiDBLite consensus disorder prediction 1 87 - -
Dod01g3124 1197 MobiDBLite consensus disorder prediction 101 126 - -
Dod01g3124 1197 Pfam RING/Ubox like zinc-binding domain 168 216 - -
Dod01g3124 1197 MobiDBLite consensus disorder prediction 1 53 - -
Dod01g3124 1197 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 620 772 IPR029044 -
Dod01g3124 1197 MobiDBLite consensus disorder prediction 219 242 - -
Dod01g3124 1197 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 151 238 IPR013083 -
Dod01g3124 1197 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 121 1194 - -
Dod01g3124 1197 SUPERFAMILY RING/U-box 178 217 - -
Dod01g3124 1197 MobiDBLite consensus disorder prediction 105 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3124 Dod-Chr1 72013014 72017863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3124 38 1197 Glycosyltransferase AT3G03050 65.760 0.0 1550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3124 K00770 - tcc:18613638 2040.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3124 01 72013014 72017863 Dod01g3124 01 72013014 72017863 ECH