Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3113 ATGCCCAAAAGATTGCCCCTTTCAAAACTCTCAACATCTTCATTCTTGAGATTTCAATGGTTTCCAAACAGCAAGGAAGAACAACAACAGCACCAGCGATCACGGATCATCATCATCGTCATCATGTCCAAACAACCTAAGCTTGGTCGAGTTCCCAGCATCAGAGACAGAGTCGAAGACACTCTATCTGCTCACCGCAACGAACTCATTTCTCTCCTCTCAAGGTATGTGTCTCAGGGGAAAGGGATTTTGCAACCCCATAGTTTGATCGATGAGCTTGAAAACATCCTTGGTGAGGATCAAGCTACACAGGAACTTAAAAATGGCCCCTTTGGTGAAATCATCAAGTCTGCACAGGAAGCTATAGTTTTGCCACCTTTTGTGGCCGTAGCAGTTCGTCCAAGACCTGGTGTGTGGGAATATGTTCGTGTTAATGTCTTTGAACTCAGCGTGGAGCAACTAAGCGTTTCTGAATATCTCAGCTTCAAAGAAGAACTTGTGGATGGAAAGATTAATGACAGTTTTGTATTGGAGCTTGATTTTGAGCCATTTAATGCATCATTTCCTCGTCCCACTCGCTCGTCATCCATTGGCAATGGTGTCCAATTCCTCAATCGCCACCTTTCTTCAAGTATGTTTCGTAACAAAGATTCCTTGGAGCCCTTGCTTGATTTCCTCCGAGCTCACAAATATAAAGGCCACGCACTAATGTTGAATGATCGTATACAAAGCATTTCAAAACTTCAGTCTGCTTTGGCCAAGGCTGAGGATTATCTTTCTAAGCTTGCATCTGATACACTCTATTCTGAGTTTGAATATGTATTACAAGGAATGGGTTTCGAGAGAGGTTGGGGTGATACTGCAGAACGGGTGTTAGAGATGATCCATCTGCTACTGGATATTCTTCAGGCTCCTGATCCCTCTATACTGGAGACTTTTCTTGGGAGAGTGCCTATGGTGTTCAATGTTGTTATATTATCTCCTCATGGCTACTTTGGCCAAGCCAATGTCCTGGGTTTGCCGGACACTGGAGGACAGGTTGTTTATATACTAGACCAAGTTCGTGCCCTTGAGAATGAGATGCTCCTTCGGATCAAGAAACAAGGACTTGATTTTACTCCTAGAATTCTAATTGTTACTAGGTTAATACCTGATGCAAAGGGGACAACATGCAACCAGCGGCTAGAAAGAGTCAGTGGTACTGATTACACTCATATTTTGCGAGTTCCATTTAGATCAGATAGAGGAACCCTCCGGAAATGGATATCAAGGATGTTGCCAGTGAAATTGCTGCTGAGTTACAGGGTTATCCTGATTTTATCATTGGAAACTACAGTGATGGGAATCTTGTTGCAGTCTTTGTTGGCTTATAAAATGGGAGTTACCCAGTGCACGATAGCGCATGCACTGGAGAAGACAAAATATCCAGATTCAGATATATATTGGAAGAAATTTGAGGATAAATATCATTTTTCATGCCAGTTCACTGCTGACCTAATAGCCATGAATAATGCTGATTTTATCATCACCAGTACATACCAAGAGATTGCAGGAACGAAGAATACCGTTGGCCAGTATGAGAGCCACACTGCTTTTACTCTTCCTGGACTGTATAGGGTTGTACATGGCATTGATGTTTTTGATCCCAAGTTCAATATTGTCTCTCCTGGAGCAGATATGTCAATCTATTTCCCCTACTCTGACAAGCAGAAGAGACTTACAGCTCTGCATGGTTCAATTGAAAAGCTATTATTTGATCCTGAGCAGACTGATGAGTACATTGGTTCACTGAAAGACCGGTCAAAGCCCATAATTTTCTCCATGGCAAGGCTAGACAGAGTTAAAAACATTACTGGTTTGGTAGAAAGCTATGGTAAGAATAACAAATTGAGGGAACTGGTCAACCTAGTGGTGGTTGCCGGTTATATTGATGTAAAGAAGTCCAGTGACAGAGAAGAGATTGCAGAAATTGAGAAGATGCATGATCTCATGAAACAGTATAATCTTGATGGTGAATTTCGCTGGATTGCTGCCCAAACAAATAGAGCACGTAATGGTGAGCTGTACCGCTACATAGCGGACACAAAAGGTGCATTCATTCAGCCTGCTTTCTATGAAGCTTTTGGGCTTACAGTTGTGGAGGCCATGACTTGTGGGCTTCCCACATTTGCTACTTGCCATGGTGGTCCTGCTGAGATCATCGAGCATGGTGTTTCGGGTTTCCATATTGATCCTTATCACCCTGATCAAGCTTCTGAGCTGTTGGTTGGATTCTTCCAACGATGCAAGGAGGATCCAAGCCATTGGAATAAAATATCAGATGGTGGTCTTCAGAGAATTTATGAAAGGTACACGTGGAAGATCTATTCTGAAAGGCTTATGACCTTGGCGGGAGTCTATAGTTTCTGGAAATATGTCTCCAAATTAGAGAGGCGTGAAACCCGAAGATATCTTGAGATGTTCTATATTCTTAAGTTCCGCGATTTGGTGAGCTGA 2496 0.4263 MPKRLPLSKLSTSSFLRFQWFPNSKEEQQQHQRSRIIIIVIMSKQPKLGRVPSIRDRVEDTLSAHRNELISLLSRYVSQGKGILQPHSLIDELENILGEDQATQELKNGPFGEIIKSAQEAIVLPPFVAVAVRPRPGVWEYVRVNVFELSVEQLSVSEYLSFKEELVDGKINDSFVLELDFEPFNASFPRPTRSSSIGNGVQFLNRHLSSSMFRNKDSLEPLLDFLRAHKYKGHALMLNDRIQSISKLQSALAKAEDYLSKLASDTLYSEFEYVLQGMGFERGWGDTAERVLEMIHLLLDILQAPDPSILETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTDYTHILRVPFRSDRGTLRKWISRMLPVKLLLSYRVILILSLETTVMGILLQSLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFEDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSDKQKRLTALHGSIEKLLFDPEQTDEYIGSLKDRSKPIIFSMARLDRVKNITGLVESYGKNNKLRELVNLVVVAGYIDVKKSSDREEIAEIEKMHDLMKQYNLDGEFRWIAAQTNRARNGELYRYIADTKGAFIQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQASELLVGFFQRCKEDPSHWNKISDGGLQRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLVS* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3113 831 Gene3D - 190 319 - -
Dod01g3113 831 Gene3D Glycogen Phosphorylase B; 559 786 - -
Dod01g3113 831 Pfam Sucrose synthase 50 585 IPR000368 GO:0005985|GO:0016157
Dod01g3113 831 Pfam Glycosyl transferases group 1 597 757 IPR001296 GO:0016757
Dod01g3113 831 Gene3D Glycogen Phosphorylase B; 320 439 - -
Dod01g3113 831 PANTHER SUCROSE SYNTHASE 42 830 - -
Dod01g3113 831 Gene3D Glycogen Phosphorylase B; 450 829 - -
Dod01g3113 831 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 339 795 - -
Dod01g3113 831 TIGRFAM sucr_synth: sucrose synthase 66 829 IPR012820 GO:0005985|GO:0016157
Dod01g3113 831 PANTHER - 42 830 IPR012820 GO:0005985|GO:0016157
Dod01g3113 831 Gene3D - 67 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3113 Dod-Chr1 71861380 71869562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3113 45 830 Glycosyltransferase AT4G02280 80.451 0.0 1355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3113 K00695 - gmx:100793371 1424.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3113 01 71861380 71869562 Dod01g3113 01 71861380 71869562 ECH