Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3111 ATGGCGAAACTCTTCTCGGTCTTGGCAATCTGCGTGGCCGTGATGGCACAGCAAACCAGTGCCGCGGAGGAACTCAGGGGCCCAGAACTGATCAAGAAGGTGTGCCAAGGTTCAGACACCCAGGACGTGTGCATGCAAGTTCTGTACTCTGACCCATCAAAGGTCCAAACCGCAAACTTGAAGGACTTGGCAATCATTGCACTTCGTGTGGCCGCAGCAAACGCCTCAAGCATCCTCACCGACGTGAAGGTGTTCATCGATGACGCCAACCTTGACCCCGAAATCCAACAGGGCTTGGCCGACTGCAAGCAGACAATCTTGGACGCCGGTAGCCAGCTCGAGGACACCATCGCTGCCCTTTTGGAGGGTGCAGACAACGATGCTCACATGTGGCTTAAGGCTGCCTTTGCCGCCATTGATACCTGCGATGCCTCCATCCCCGGAAACGACGATGTTCTCTCCGTTAAGAGCGCCTCCTTCCGTAAGCTCTGCAACATTGTTGTGCTCATCACCAAGATGTTGCCACCAAGTCATCAGTGA 540 0.55 MAKLFSVLAICVAVMAQQTSAAEELRGPELIKKVCQGSDTQDVCMQVLYSDPSKVQTANLKDLAIIALRVAAANASSILTDVKVFIDDANLDPEIQQGLADCKQTILDAGSQLEDTIAALLEGADNDAHMWLKAAFAAIDTCDASIPGNDDVLSVKSASFRKLCNIVVLITKMLPPSHQ* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3111 179 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 174 IPR035513 -
Dod01g3111 179 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1 174 IPR006501 GO:0004857
Dod01g3111 179 Pfam Plant invertase/pectin methylesterase inhibitor 30 167 IPR006501 GO:0004857
Dod01g3111 179 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 174 IPR035513 -
Dod01g3111 179 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 3 175 - -
Dod01g3111 179 SMART PMEI_2 26 170 IPR006501 GO:0004857
Dod01g3111 179 PANTHER PECTINESTERASE 3 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3111 Dod-Chr1 71818042 71818581 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3111 - - gmx:100785595 218.009