Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3109 ATGGAGAAAATAGAGCACTCATGGGTGAAGACCAACGGAATAAGGATGCACGTGGCATCAATAGGGTCAGGGCCGGTAGTGCTCTTCCTCCACGGCTTCCCGGAGCTCTGGTACGCATGGCGCCACCAGCTTCTCTCCCTCTCCGCCCTCGGCTACCGCGCAATCGCCCCTGACCTCCGCGGCTACGGCGACACCGACGCCCCGCCCTCCGCCTCCTCCTACTCCGCCCTCCACATCGTCGGCGACATCGTCGGCCTCCTCGACGCCCTCCGCATCGAGCAGGTGTTCCTGGTTGGCCACGACTGGGGCGCCGCCATGGCCTGGTATTTCTGCCTACTGAGGCCCGATCGCGTGAAGGCGCTTGTGAACATGAGCATCGTGTTCCGTCCAAGGAACCCTAAGAGGAAACCTGTGGAGAGCTTGAGGGCTATGCTTGGCGATGATTACTATATGTGCAGGTTTCAGAAACCTGGGGAGGTTGAAGAAGAGTTTGCCCGTGCCGGTACTGCAAGAATAATAAAAACATTTCTTGCATCTCGTGATCCACGTCCACCTTGTGTGCCTAAGGAGATAGGATTTGATGGCTTGCCGAATACCCCTATTGCTTTACCTTCGTGGCTATCAGAAGAAGATGTCAATTATTATGCTAGCAAATTTGACCAGAAAGGCTTCACAGGCGGGCTAAACTACTATCGCGCTCTGGACTTAACGTGGGAGTTGACAGCACCTTGGACTGGAGTACAGATCAAAGTGCCGGTCAAGTTCATTGTGGGAGACCTCGACGTTACATATAACACTCCAGGTGTTAAGGAGTACATACATAATGGTGGCTTGAAGAGAGACGTGCCGTTCCTGCAGGAACTGGTTGTAATGGAAGGGGTAGCTCACTTTATAAATCAAGAAAAACCAGAAGAGATCAGCGCTCACATATACGACTTCATCAAGAAATTTTAA 954 0.5283 MEKIEHSWVKTNGIRMHVASIGSGPVVLFLHGFPELWYAWRHQLLSLSALGYRAIAPDLRGYGDTDAPPSASSYSALHIVGDIVGLLDALRIEQVFLVGHDWGAAMAWYFCLLRPDRVKALVNMSIVFRPRNPKRKPVESLRAMLGDDYYMCRFQKPGEVEEEFARAGTARIIKTFLASRDPRPPCVPKEIGFDGLPNTPIALPSWLSEEDVNYYASKFDQKGFTGGLNYYRALDLTWELTAPWTGVQIKVPVKFIVGDLDVTYNTPGVKEYIHNGGLKRDVPFLQELVVMEGVAHFINQEKPEEISAHIYDFIKKF* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3109 317 PRINTS Epoxide hydrolase signature 51 66 IPR000639 GO:0003824
Dod01g3109 317 PRINTS Epoxide hydrolase signature 251 267 IPR000639 GO:0003824
Dod01g3109 317 PRINTS Epoxide hydrolase signature 31 49 IPR000639 GO:0003824
Dod01g3109 317 PRINTS Epoxide hydrolase signature 291 313 IPR000639 GO:0003824
Dod01g3109 317 PRINTS Epoxide hydrolase signature 111 124 IPR000639 GO:0003824
Dod01g3109 317 PRINTS Epoxide hydrolase signature 97 110 IPR000639 GO:0003824
Dod01g3109 317 PANTHER HYDROLASE, PUTATIVE-RELATED 1 317 - -
Dod01g3109 317 PRINTS Alpha/beta hydrolase fold signature 97 110 IPR000073 -
Dod01g3109 317 PRINTS Alpha/beta hydrolase fold signature 51 66 IPR000073 -
Dod01g3109 317 PRINTS Alpha/beta hydrolase fold signature 111 124 IPR000073 -
Dod01g3109 317 Pfam alpha/beta hydrolase fold 25 130 IPR000073 -
Dod01g3109 317 SUPERFAMILY alpha/beta-Hydrolases 2 316 IPR029058 -
Dod01g3109 317 Gene3D alpha/beta hydrolase 1 317 IPR029058 -
Dod01g3109 317 PANTHER EPOXIDE HYDROLASE 1 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3109 Dod-Chr1 71794266 71798527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3109 1 317 Acyl Lipid Metabolism Gene Families AT4G02340 71.609 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3109 - - gmx:100799903 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3109 01 71794266 71798527 Dod01g3109 01 71794266 71798527 ECH