Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3107 ATGCACTCCTCCAAGCCACCTCGCCGGAAAGTTGCTCCGGCGAATGGCGACGACTCCGCCGACAAGCTCGACCAGCTTCTCCTCTCCTCTGCCATCTGCAACAACGAGGACCTCGGCCCCTTCATCCGCAAGACCTTCGCCTCCGGCAAGCCGGAGACGCTCCTCCACCACCTCCGCCAGTTCGCGCGCTCCAAAGAATCTGAGATCGAAGAAGTCTGCAAGGCGCACTACCAGGACTTCATCCTCGCCGTCGATGACCTCCGATCGCTCCTTTCCGACGTCGACGACCTCAAGTCCTCACTCTCCGACTCCAACTCCAAGCTCCAATCGGTGGCGCGGCCGCTTCTCTCTTCGCTCGACGCTTTCGTCGAGACGCGAAACGTGTCGCGGAACGTAAACCTCGCGATCGAGTCGGTGCGAACTTGCGTGCGGCTGATGGAGGTTTGCTCGCGCGCGAACCGCCACCTCTCCGGCCACAACTTTTACATGGCGCTGAAGTGCGTGGACGCGATTGAGAGGGAGTACCTGGACAAAACACCGTCGTCGACGCTGAAGAAGATGCTGGAGAAGAAGATCCCGGAGATCCGGTCGCACATAGAGAGGAAGGTGAACAAGGAGTTCGGCGACTGGCTGGTTGAGATCCGTGTGGTGAGTCGCCAACTCGGACAGCTGGCGATCGGACAGGCCTCGGCAGCGCGGCAGAGAGAAGAGGATCTCAGGATCAAGCAGCGGCAAGCGGAGGAGCAGAGCAGGCTCAGCGTCAGGGACTGCATTTACGCCTTGGAGGAGGAGGAAGACGACGGAATCGCCGCAGGTGGTGGCGGAATCGGGGAGGACGCGTACGGTAACGGCGGCGGCGGTGGAATTGTTGGCTTTGATTTGACTCCATTGTATAGGGCTTACCATATTCACCAGACGTTAGGGTTGGAAGAGCGGTTCAAGCAGTATTACTTTGAGAATCGGAAGCTTCAGTTGACTTCGGATTTTCAGGTATCTTCGATGACTCCTTTTCTTGAATCGCATCAGACTTTTTTCGCACAGATTGCGGGTTTCTTTGTGGTGGAGGATCGGGTTTTTAGGACTGGTGGTGGCTTGATATCGAAGATGGAGGTTGAGAACCTGTGGGAGATTGCTGTTAGCAAGATGTGTTCTGTGTTGGAGGATCAGTTCTCCAGAATGCAGACGGCGAATCACCTCTTGCTCATTAAGGACTATGTTAGCCTTTTGGGAGTGACCCTGCGTAGGTATGGGTACCCCATTGATGCGTTGCTTGATGTTTTGAGCAAACATAGGGATAAATACCATGAGCTTCTGTTGTCCGATTGTCGGAAGCAGATTGCTGAGGCACTTGCTGCTGACAAGTTTGAGCAGATGTTGATGAAGAAAGAGTATGAGTACTCCATGAATGTTCTCTCTTTCCAAATACAAACCTCGGATATTGTACCTGCTTTTCCTTATGTTGCACCGTTTTCATCTACCGTGCCAGATTGTTGCCGCATTGTGCGGTCCTTTATTGAGGATTCTGTGAGTTTCATGTCATATGGCGGGCAGCTTGAGTTCTATGAAGTCGTTAAGAAATATTTAGACAGGCTGTTGAGCGAGGTACTAGATGAAGCTTTATTAAAGCTTATTCATACATCAGTTAGTGGGGTGCCCCAGGCAATGCAAATGGCAGCAAATATGGCTGTGTTCGAGCATGCGTGTGATTTCTTCTTTCGCCATGCTGCACAGCTTTCGGGGGTTCCCTTGAGAATGGTGGAGAGAAGCAGGAGGCAGTTCCCTCTGAGGAAAGCTCGCGATGCTGCAGAAGAAACGCTCTCTGGGCTACTTAAGACTAAAGTTGATGGATTTATGATGTTGATTGAGAATGTAAATTGGATGGCTGATGAGCCACCACAAAGTGGTAATGAATATGTGAATGAGGTCATTATTTACTTGGAAATTTTGGTTTCAACTGCTCAACAGATACTGCCAACTCAAGTTCTTAAAAGAGTTCTACAGCAGGTTCTTTCTCACATATCGGAGAAGATAGTTGGGGCTTTAATTAGTGATTCTGTTAAGAGGTTTAGTGCGAATGCCGTAACTGGAATTGATGTGGACATCCGACTCTTAGAACAATTTACAGATAATCTGGGCCCCCTTTTTGCTGATGGGGATGCTGATCAGTTGAAGACAGCACTTGTTGAGGCAAGGCAGTTGGTTAATTTGCTATTAAGCAATCATCCGGAGAACTTCCTGAATGCAGTGATCAGGGAGAGGAGTTACAATACTTTGGACCACAGGAAGGTGGTGATTGTTTCAGAAAAGTTGAAGGATCCTTCAGATCGGATCTTTGGAACCTTTGGTAGTCGTGGAGCCAGGCAGAATCCAAAAAAGAAATCACTGGATACATTGATAAAAAGACTTAAGGATGTTAGCTGA 2421 0.5002 MHSSKPPRRKVAPANGDDSADKLDQLLLSSAICNNEDLGPFIRKTFASGKPETLLHHLRQFARSKESEIEEVCKAHYQDFILAVDDLRSLLSDVDDLKSSLSDSNSKLQSVARPLLSSLDAFVETRNVSRNVNLAIESVRTCVRLMEVCSRANRHLSGHNFYMALKCVDAIEREYLDKTPSSTLKKMLEKKIPEIRSHIERKVNKEFGDWLVEIRVVSRQLGQLAIGQASAARQREEDLRIKQRQAEEQSRLSVRDCIYALEEEEDDGIAAGGGGIGEDAYGNGGGGGIVGFDLTPLYRAYHIHQTLGLEERFKQYYFENRKLQLTSDFQVSSMTPFLESHQTFFAQIAGFFVVEDRVFRTGGGLISKMEVENLWEIAVSKMCSVLEDQFSRMQTANHLLLIKDYVSLLGVTLRRYGYPIDALLDVLSKHRDKYHELLLSDCRKQIAEALAADKFEQMLMKKEYEYSMNVLSFQIQTSDIVPAFPYVAPFSSTVPDCCRIVRSFIEDSVSFMSYGGQLEFYEVVKKYLDRLLSEVLDEALLKLIHTSVSGVPQAMQMAANMAVFEHACDFFFRHAAQLSGVPLRMVERSRRQFPLRKARDAAEETLSGLLKTKVDGFMMLIENVNWMADEPPQSGNEYVNEVIIYLEILVSTAQQILPTQVLKRVLQQVLSHISEKIVGALISDSVKRFSANAVTGIDVDIRLLEQFTDNLGPLFADGDADQLKTALVEARQLVNLLLSNHPENFLNAVIRERSYNTLDHRKVVIVSEKLKDPSDRIFGTFGSRGARQNPKKKSLDTLIKRLKDVS* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3107 806 PIRSF Sec15 3 806 IPR007225 GO:0006886|GO:0090522
Dod01g3107 806 PANTHER SEC15 7 806 IPR007225 GO:0006886|GO:0090522
Dod01g3107 806 Pfam Exocyst complex subunit Sec15-like 466 770 IPR046361 -
Dod01g3107 806 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 598 745 IPR042044 -
Dod01g3107 806 Gene3D - 420 592 IPR042045 -
Dod01g3107 806 PANTHER EXOCYST COMPLEX COMPONENT SEC15B 7 806 - -
Dod01g3107 806 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3107 Dod-Chr1 71784640 71787443 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3107 K19985 - gmx:100796432 1348.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3107 01 71784640 71787443 Dod01g3107 01 71784640 71787443 ECH