Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3106 ATGATGAAGCCCACAATTGCACTTGTTTGTATCCTGTTATACGCGACAGTTGCACACGCGTTAAGGGAACAAGAGAAGCTGTCAGCATACGATGTTCTAGAGCAATATGACTTCCCAGTGGGTATCCTCCCAAAAGGTGCCACGGGGTATGAGCTCAACACAAAGACAGGCCAGTTCACAGCGTATTTGAATGAGACATGCAGCTTCAAAATAGAGTCCTACCAGCTCAAGTACAAGTCAACCATTAAGGGAGTGATCTCGAAGGGAAGGTTGGCCAAGTTGAAGGGCGTGAGTGTGAAGATTGCATTGTTGTGGCTCAACATTGTTGAGGTCACCCGTGACGGTGATGACCTCCAGTTCTCAGTGGGCATTGCCTCCGCTGACTTTGGTGTGGACAACTTTCTTGAGAGCCCTCAGTGTGGATGTGGATTCAATTGCAACAATCAAAGGAAAAATAATGGTGGTGATGTCATTTCTTCCATTTAG 486 0.4671 MMKPTIALVCILLYATVAHALREQEKLSAYDVLEQYDFPVGILPKGATGYELNTKTGQFTAYLNETCSFKIESYQLKYKSTIKGVISKGRLAKLKGVSVKIALLWLNIVEVTRDGDDLQFSVGIASADFGVDNFLESPQCGCGFNCNNQRKNNGGDVISSI* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3106 161 Pfam Protein of unknown function, DUF538 29 134 IPR007493 -
Dod01g3106 161 PANTHER T31J12.3 PROTEIN-RELATED 7 152 IPR007493 -
Dod01g3106 161 PANTHER DUF538 FAMILY PROTEIN 7 152 - -
Dod01g3106 161 SUPERFAMILY At5g01610-like 6 146 IPR036758 -
Dod01g3106 161 Gene3D - 14 137 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3106 Dod-Chr1 71780964 71782003 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3106 - - aip:107645643 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3106 01 71780964 71782003 Dod01g3106 01 71780964 71782003 ECH