Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3100 ATGGCTTCGGAATTGATATTCAGAGGGCACGAGGCCCAACCCGTGAACGACGCCTACTACCCAAAGCCACACAAGCCATGGGTATGGCTCACCGTGACCAGACCCATCCGCTACATGCTCAGGGAGCAGAGGCTCGCCTTCGTCCTCCTCGGCATTCTCATCGCCTCATTATTCTTCACCCTCGTCCCATCATCATCATCATCATCTTCGTCGCCTTACCAGAAATACGACGCCGTTCCGATCTCATACTTCGAGCAGCCGAGTACTCAACGCTACGCTTCCTCTTCGTACGGAGGCGTATCGGTGGGGAAGGTGCCGCTGGGGATAAAGAGGAAAGGGCTCCGGATCGTGGTGACGGGCGGTGCCGGGTTCGTCGGGTCCCACCTGGTGGATCGGCTTATTGCGAGAGGGGACAGCGTGATGGTTGTTGACAACTTCTTCACTGGGAGGAAGGAGAACGTGATGCACCACTTCGGGAACCCGAGGTTCGAGCTCATCCGACACGACGTCGTTGAGCCACTCCTCCTCGAGGTCGACCAGATCTACCACCTCGCATGCCCCGCTTCCCCTGTTCACTACAAGTTCAACCCAGTCAAGACCATCAAGACCAATGTGGTCGGCACGCTCAACATGCTGGGGCTGGCCAAGAGAGTCGGGGCGAGGTTCTTGCTCACCAGCACCAGTGAGGTTTATGGAGATCCTCTGCAACATCCTCAGAAGGAGACTTACTGGGGCAACGTTAATCCCATTGGTGTCCGAAGCTGCTATGACGAGGGAAAGCGTACGGCTGAGACGTTGACTATGGACTACCACAGAGGAGCTGGAGTCGAGGTTCGAATCGCTAGGATCTTTAACACCTATGGCCCCCGAATGTGCTTAGATGATGGCCGTGTTGTTAGTAACTTCGTTGCTCAGGCACTAAGGAAGGAGCCTTTGACGGTTTATGGGGATGGGAAGCAGACAAGGAGTTTCCAGTATGTTTCTGATTTGGTGGAGGGTCTGATGCGCCTAATGGAAGGAGAACACGTGGGACCTTTCAATCTCGGAAATCCGGGTGAATTCACCATGCTTGAACTTGCCAAGGTGGTCCAAGAAACAATCGATCCAGATGCAAAGATAGAGTACAGGCCCAACACAGAGGATGACCCACACAAGAGAAAGCCTGATATTAGTAGGGCTAGGGAGCTACTTGGCTGGGAACCCAAGGTGGACCTTCGCAAGGGACTCCCTCTAATGGTTTCTGACTTCCGACAGCGCATTTTTGGTGACCACAAGGAAGGTTCAACCTCCGCCTAA 1296 0.5424 MASELIFRGHEAQPVNDAYYPKPHKPWVWLTVTRPIRYMLREQRLAFVLLGILIASLFFTLVPSSSSSSSSPYQKYDAVPISYFEQPSTQRYASSSYGGVSVGKVPLGIKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVMVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPDAKIEYRPNTEDDPHKRKPDISRARELLGWEPKVDLRKGLPLMVSDFRQRIFGDHKEGSTSA* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3100 431 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 427 IPR044516 GO:0042732|GO:0048040|GO:0070403
Dod01g3100 431 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 112 421 IPR036291 -
Dod01g3100 431 Gene3D - 237 421 - -
Dod01g3100 431 Gene3D - 110 236 - -
Dod01g3100 431 CDD UGD_SDR_e 115 417 - -
Dod01g3100 431 Pfam GDP-mannose 4,6 dehydratase 118 410 IPR016040 -
Dod01g3100 431 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE 4 1 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3100 Dod-Chr1 71678646 71684443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3100 111 427 Miscellaneous Gene Families AT1G02000 25.788 1.03e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3100 K08678 - gmx:100783463 764.992