Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3096 ATGTCGGAAGCAGCAACAGCAGCAGAGATGAACATGTTCTCCTCACTGAGCGACGACATCATCCTCAACATCTTCCACAACCTCGAAGACGACCCTCGCCACTGGGCTCGCCTGGCCTGCGTGTGCACCAAATTCTGCTCCCTCATCCGCAACTCCTGCTGCAGGACCACCTGCACCCGCACCATCCCCTCCGACCTCCTCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCATGGGCTTCCCTCCACAAGCTCTCCGTCTGCTGCCCCGGCCCCCTCCACGCCGGCCTCCTCCTCGACACCTCCGACTTCGGCCTCCACCTCGACCTTGGCCCCGACCACCCCCTCTCTCTATCCTCTACCACCACCACAACCCCCACCACCACCACCCCCTTTCTCATTGTTCCCTCCAACGACGCCGTTTCTTCCAACTCTCATTGGTCCCTCTTCGATGATCTTTACTACGACACCGTTTACGACACTTCCGAGTCCGAGTCCCAACATGGGTCTCACTCTCAACAACAACAACAACAGCCACCACCACCCCTGGTTTTGGATGAGGTTCGTGAAGGTGTTGTTGCTTCTGCGAAGCCGTGTAAGAAGAGGAAGGTTTGTGGTAGTAGTAGGTCGTGGAGTTCGCATCTTGCTTCTGGGACTTGGACCCTTAGCAGGGAACAAGGTAGCAAGCTGCTAGCGAGGCAGTTTCGTGATGATTGCTTGTATATATGTGATTGGCCTGGCTGTGTTCACTCGGAGGAGAAGAGAAAGTACAGGCTCTTCCGAGGGGTTTTCAAGAACTTCAAGAGGACGCGGGTGTGGAGGACCATCAATGATGGGAAGAAGAAGAGGATTGATCTGGGTTGCGCTTTTTGTCTGTGTGAGGAGACGTGGGATCTGCTATCTGCTTTTTGCTTGAGGAGGGACTTTGGGTACCATGATGATGGGGAGCCTGTTGTTAGGGCTTTTGTCTGTGAGAATGGTCATGTCTCTGGTGCCTGGACTGATGTCCCCATGTACACTTAG 1029 0.5539 MSEAATAAEMNMFSSLSDDIILNIFHNLEDDPRHWARLACVCTKFCSLIRNSCCRTTCTRTIPSDLLPSSSSSSSSSSSSWASLHKLSVCCPGPLHAGLLLDTSDFGLHLDLGPDHPLSLSSTTTTTPTTTTPFLIVPSNDAVSSNSHWSLFDDLYYDTVYDTSESESQHGSHSQQQQQQPPPPLVLDEVREGVVASAKPCKKRKVCGSSRSWSSHLASGTWTLSREQGSKLLARQFRDDCLYICDWPGCVHSEEKRKYRLFRGVFKNFKRTRVWRTINDGKKKRIDLGCAFCLCEETWDLLSAFCLRRDFGYHDDGEPVVRAFVCENGHVSGAWTDVPMYT* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3096 342 MobiDBLite consensus disorder prediction 165 184 - -
Dod01g3096 342 Gene3D - 1 88 - -
Dod01g3096 342 SUPERFAMILY F-box domain 5 86 IPR036047 GO:0005515
Dod01g3096 342 MobiDBLite consensus disorder prediction 165 183 - -
Dod01g3096 342 Pfam F-box domain 13 52 IPR001810 GO:0005515
Dod01g3096 342 PANTHER PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN 6 342 - -
Dod01g3096 342 PANTHER EID1-LIKE F-BOX PROTEIN 2-RELATED 6 342 IPR040267 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3096 Dod-Chr1 71634841 71636626 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3096 - - cic:CICLE_v10021114mg 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3096 01 71634841 71636626 Dod01g3096 01 71634841 71636626 ECH