Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3091 ATGTCATCCTCTGCAACATGGATCACTTCCATCTCGTGTGCATCCCCCGTGAAACAAACCTCAGGGGGCACGTTCATCTCAACTCTGCCTCAGTGGCTGAGATTCATTTTCCTCACACCTTGTCCTCAGAGAGCTATGTTGTCTGCAGTTGATGTCTTACTCTTGATCACCCTCTTTGTGTTTGCTGTAGACAAGCTCTATTCTCGGTTCACCTCCTCCACCGAGCCCTCTCAGAATGACCTCAACAAGCCACTCATCAGAAGTAACAGGTCATTCGTCAGAACATCTCGATGGTTTAAGCTGACTCTAATTGCAACTGCTATTTTGGCCATTCTGTACACGGTCACTTGTGTTATGGTGTTTAGCAGTTCAACTGAGGTTCCATGGAAGCAAATTGATGGAGCATTTTGGTTAGTCCAGGCCATAACGCAAGCAGTACTTGCAATCTTGATCGTCCATGAGAAAAGATTTGATGCCGTTGCTCACCCATTATCGATTCGAGTTTATTGGATTGCGAATTTCTTCCTCATTTGCCTTTTCACTGCTTCTGGTGTTATACGTTTGGTCTCTGCGGATGTTGATGGGAGCAAAGGGTTCGTATTCAAGGTGGATGACATTGTCTCTTTCATTTCTCTCCCTTTGTCACTGTTCCTTCTTTTTGTTGCGGTTAAAGGGTCCACTGGCATTATGTCCACTGAGGAAACACAAGCACTTATTGATCAGGAAACGAAGCTATACGATGATCTCAAATCCGAGGTAACTGGCTTTGCTTCAGCTTCTATAGTATCCAAGGCTTTTTGGACTTGGTTAAACCCCTTGTTGAGTAAAGGGTACAAGTCCCCACTGAAGGTTGATGAGATTCCAACCCTTTCCCCTGAGCATAGAGCGGAGAGGTTGTCAGCTATCTTTGAATCAAAATGGCCTAAATCAAATGAGAAGACGAAGCATCCGGCTCGAATCACGTTGCTCCGGTGCTTCTGGAAGGAAGTGGCCTTCACTGCCTTTCTTGCAATTGTCAGGCTCTGTGTCATGTTTGTAGGGCCGCTCCTCATACAAAGCTTTGTTGATTTCACTTCAGGGAAGAGAACCTCTGAATATGAGGGGTACTACCTAGTGTTGATTCTCCTTGTTGCCAAGTTTATAGAAGTTTTGAGCACTCACCATTTCAACTTCAATTCTCAGAAGCTTGGGATGCTTATCCGATGCACACTCATTACTTCTTTGTACAAGAAGGGCCTGAAGCTATCTTGCTCAGCACGGCAGGATCATGGTGTGGGGACTATTGTGAATTACATGGCTGTTGATGCTCAGCAACTCTCAGATATGATGATGCAGTTACATGCTATGTGGATGACTCCGCTTCAAGTTGCTGTCTCCCTAGTTCTTCTTTACAATTGTCTTGGGCCGTCAGTGGTTACGGCCTTGCTTGGACTTCTTGGTGTTCTAGTCTTTGTTGTGATTACCACCCGTAATAACAATGGTTTCCAATTCAGCATGATGAGAAACCGTGACTCAAGAATGAAAGCCATGAATGAGATGCTTAACTATATGCGTGTGATCAAATTCCAGGCTTGGGAGGAGCATTTCAACAAGAGAATTATGGGGTTCCGGCAGACAGAGTATGAGTGGCTTTCCAAGTTCATGTTCTCCATTTGTGGCAACATTGTTCTGATGTGGAGCGCACCAGTGTTGATATCAGCTATAACATTTGGTACGGCTCTTTTGCTTGGAGTTCAACTTGATGCAGCCACGGTTTTCACAACAACTTCTCTCTTCAAGATCTTGCAGGAGCCTATTAGGACATTCCCACAGTCTATGATATCGCTTTCACAAGCAATGATATCACTGGGAAGGTTGGATAGATACATGTTGAGCAAGGAATTGTCAAATGATTCAGTTGAAAGAGAGGAAGGCTGCGATGGACAAACTGCTGTAGAGGTCAGAGATGGGACCTTCAGCTGGGATGATGATGATAGCCTGAAGCAGCATGACTTGAGAAATATTAATTTGGAGATCAGAAAGGGGGAGCTTACAGCAGTTGTTGGGACTGTGGGATCGGGAAAGTCATCTCTCCTTGCATCCATTCTTGGTGAGATGCGCAAAATTTCTGGAAAGGTTCGGGTTTGTGGGAGCACTGCTTATGTTGCACAAACATCTTGGATTCAAAATGGGACCATTGAAGAAAACATTCTCTTTGGTTTGCCAATGGACAGACAGAAGTACAATGAAGTGATCAGGGTTTGTTGTTTGGAGAAGGATTTGGAAATGATGGAGTATGGGGATCAGACAGAGATTGGAGAGCGTGGCATCAACCTCAGTGGTGGCCAGAAGCAGCGTATACAACTTGCCAGAGCTGTTTATCAAGACTGTGATATATATCTTCTTGATGACGTCTTTAGTGCTGTTGATGCTCATACTGGTTCTGAAATATTTAAGGAATGCGTGAGGGGGACTCTAAAAGGCAAGACCGTAATTCTTGTAACGCACCAAGTAGATTTCTTACATAATGTGGATCTTATATTAGTGATGAGGGATGGAATGATAGTCCAATCAGGAAAGTACGATGACCTTCTAAATTCTGGACTGGATTTTAAAGCTCTGGTAGTTGCACACGAGACCTCTATGGAACTAGTGGAGCAGGGTGCGGTCATTCCTGATCAAAATATGGACAAACCATTGAAATCTCCGAAATTGGCTAATCACGGGGGAATCAATGGTGAAAGCAATTCCCTTGACCAGCCCAAGTCTGACAAGGAAAATTCTAAACTCATCAAAGAAGAGGAGAGAGAAACTGGCAAAGTGAGCTTGCATATGTACAAGCTCTACTGCACTGAGGCTTTTGGGTGGTGGGGCATTACAGTAGTGTTGCTCCTTTCTTTGTTATGGCAAGCATCTTTAATGGCAAGTGATTATTGGCTGGCATATGAAACATCAGAAGATCGAGCTCTAGTGTTTAACCCTTCTCTGTTTATTTCCATCTATTTAATTATTGCTGCTATTTCGGTTGTTTTGGTAATGATAAGGTCCTACTTCTATACATTCATGGGGCTGAAGACAGCACAGCTTTTCTTCACTCAAATTCTTCATAGCATCTTGCATGCGCCTATGTCTTTCTTTGACACTACACCATCCGGGAGAATTCTAAGTAGGGCATCCACTGATCAGACCAATGTTGATATCCTTCTCCCCATGTTTTTGGGCATTGTTATTGCCATGTACATTACAGTGCTAAGTATCTTCATCGTCACCTGTCAGAATGCTTGGCCAACAGCGTTATTATTGATTCCTCTTATGTGGCTGAATATATGGTACCGGGGTTACTTTCTTGCTTCTTCCCGTGAATTGACTCGGTTGGATCAAATTACCAAAGCACCTATTATTCATCACTTCTCTGAAAGCATTTCGGGGGTCATGACAATCCGAGCCTTCAGAAAGCAGAATAGGTTTACTGAAGAGAATGTTAAAAGGGTGAATGCTAATTTACGAATGGATTTCCACAACTATAGTTCCAATGAGTGGTTGGGGTTCCGCATAGAATTTCTTGGAAGCTTAGTCTTCTGCATTTCTGCTGTGTTCATGATACTCTTACCCAGCAATGTCATTAAGCCAGAAAATGTTGGTTTATCTCTCTCCTACGGTTTGTCCTTAAATTCGGTCTTGTTCTTTGCTGTATACATGAGCTGTTTCATTGAGAACAAGATGGTCTCTGTCGAGAGGATAAAGCAGTTTACAAATATTCCATCAGAACCAGCATGGAATATTAGGGATCGCCTACCTCCTCCAAATTGGCCAGGTCAAGGCAATGTAGATATCAAAGACTTGCAGGTCAGATATCGTCCAAATACTCCTCTGGTTATTAAAGGCATTACATTAAGCATTAGTGGAGGAGAAAAGATCGGTGTTGTAGGCCGAACAGGGAGTGGAAAGTCAACTTTAATTCAAGTTTTCTTTAGGCTGGTGGAACCTACAGGAGGGAAAATAATCATTGATGGTATTGACATATCCGTCTTGGGGCTTCATGATCTTAGATCTCGCTTTGGCATCATTCCTCAGGAGCCTGTCCTTTTTGAAGGAACCGTCAGAAGCAACATTGACCCAATTGGGCAGTACACAGACGAAGAGATATGGAAGAGTTTGGAACGTTGTCAACTAAAAGAGGCGGTGGCTGCTAAGCCTGGAAAACTCGATTCCTTAGTGGTGGATAACGGAGAGAACTGGAGCGTGGGGCAGAGGCAGTTGCTTTGCTTGGGGCGCATTATGCTTAAGCGAAGCCGGCTCCTGTTTATGGACGAGGCTACTGCTTCCGTTGATTCTCAAACCGATGGCGTAATTCAGAAGATCATTAGAGAGGACTTTGCAGCATGTACCATAATCAGCATTGCTCACAGAATTCCCACAGTCATGGACTGTGACAGAGTTTTGGTTGTAGATGCAGGGTGGGCCAAAGAATTTGATGAGCCTTCCAATTTACTTAAAAGGACATCTCTCTTTGGGGCATTAGTTCAAGAGTATGCTAACCGCTCCGCTGGACTGTAA 4536 0.4381 MSSSATWITSISCASPVKQTSGGTFISTLPQWLRFIFLTPCPQRAMLSAVDVLLLITLFVFAVDKLYSRFTSSTEPSQNDLNKPLIRSNRSFVRTSRWFKLTLIATAILAILYTVTCVMVFSSSTEVPWKQIDGAFWLVQAITQAVLAILIVHEKRFDAVAHPLSIRVYWIANFFLICLFTASGVIRLVSADVDGSKGFVFKVDDIVSFISLPLSLFLLFVAVKGSTGIMSTEETQALIDQETKLYDDLKSEVTGFASASIVSKAFWTWLNPLLSKGYKSPLKVDEIPTLSPEHRAERLSAIFESKWPKSNEKTKHPARITLLRCFWKEVAFTAFLAIVRLCVMFVGPLLIQSFVDFTSGKRTSEYEGYYLVLILLVAKFIEVLSTHHFNFNSQKLGMLIRCTLITSLYKKGLKLSCSARQDHGVGTIVNYMAVDAQQLSDMMMQLHAMWMTPLQVAVSLVLLYNCLGPSVVTALLGLLGVLVFVVITTRNNNGFQFSMMRNRDSRMKAMNEMLNYMRVIKFQAWEEHFNKRIMGFRQTEYEWLSKFMFSICGNIVLMWSAPVLISAITFGTALLLGVQLDAATVFTTTSLFKILQEPIRTFPQSMISLSQAMISLGRLDRYMLSKELSNDSVEREEGCDGQTAVEVRDGTFSWDDDDSLKQHDLRNINLEIRKGELTAVVGTVGSGKSSLLASILGEMRKISGKVRVCGSTAYVAQTSWIQNGTIEENILFGLPMDRQKYNEVIRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSEIFKECVRGTLKGKTVILVTHQVDFLHNVDLILVMRDGMIVQSGKYDDLLNSGLDFKALVVAHETSMELVEQGAVIPDQNMDKPLKSPKLANHGGINGESNSLDQPKSDKENSKLIKEEERETGKVSLHMYKLYCTEAFGWWGITVVLLLSLLWQASLMASDYWLAYETSEDRALVFNPSLFISIYLIIAAISVVLVMIRSYFYTFMGLKTAQLFFTQILHSILHAPMSFFDTTPSGRILSRASTDQTNVDILLPMFLGIVIAMYITVLSIFIVTCQNAWPTALLLIPLMWLNIWYRGYFLASSRELTRLDQITKAPIIHHFSESISGVMTIRAFRKQNRFTEENVKRVNANLRMDFHNYSSNEWLGFRIEFLGSLVFCISAVFMILLPSNVIKPENVGLSLSYGLSLNSVLFFAVYMSCFIENKMVSVERIKQFTNIPSEPAWNIRDRLPPPNWPGQGNVDIKDLQVRYRPNTPLVIKGITLSISGGEKIGVVGRTGSGKSTLIQVFFRLVEPTGGKIIIDGIDISVLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYTDEEIWKSLERCQLKEAVAAKPGKLDSLVVDNGENWSVGQRQLLCLGRIMLKRSRLLFMDEATASVDSQTDGVIQKIIREDFAACTIISIAHRIPTVMDCDRVLVVDAGWAKEFDEPSNLLKRTSLFGALVQEYANRSAGL* 1512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3091 1511 SUPERFAMILY ABC transporter transmembrane region 321 623 IPR036640 GO:0005524|GO:0016021
Dod01g3091 1511 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 645 870 IPR003439 GO:0005524
Dod01g3091 1511 CDD ABC_6TM_ABCC_D1 332 619 IPR044746 GO:0140359
Dod01g3091 1511 Pfam ABC transporter transmembrane region 332 598 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod01g3091 1511 Pfam ABC transporter transmembrane region 985 1207 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod01g3091 1511 Pfam ABC transporter 1287 1434 IPR003439 GO:0005524
Dod01g3091 1511 Gene3D ABC transporter type 1, transmembrane domain 320 620 IPR036640 GO:0005524|GO:0016021
Dod01g3091 1511 Gene3D - 621 887 IPR027417 -
Dod01g3091 1511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 642 867 IPR027417 -
Dod01g3091 1511 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 331 611 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod01g3091 1511 ProSitePatterns ABC transporters family signature. 772 786 IPR017871 GO:0005524
Dod01g3091 1511 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1269 1503 IPR003439 GO:0005524
Dod01g3091 1511 Pfam ABC transporter 665 798 IPR003439 GO:0005524
Dod01g3091 1511 Gene3D - 1253 1502 IPR027417 -
Dod01g3091 1511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1261 1502 IPR027417 -
Dod01g3091 1511 CDD ABCC_MRP_domain1 645 846 - -
Dod01g3091 1511 CDD ABCC_MRP_domain2 1267 1487 - -
Dod01g3091 1511 Gene3D ABC transporter type 1, transmembrane domain 915 1250 IPR036640 GO:0005524|GO:0016021
Dod01g3091 1511 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 954 1232 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod01g3091 1511 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 90 1510 - -
Dod01g3091 1511 SUPERFAMILY ABC transporter transmembrane region 949 1249 IPR036640 GO:0005524|GO:0016021
Dod01g3091 1511 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 90 1510 - -
Dod01g3091 1511 Coils Coil 1140 1160 - -
Dod01g3091 1511 CDD ABC_6TM_ABCC_D2 952 1244 IPR044726 GO:0140359
Dod01g3091 1511 SMART AAA_5 1295 1479 IPR003593 -
Dod01g3091 1511 SMART AAA_5 674 855 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3091 Dod-Chr1 71580424 71588079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3091 645 863 Calmodulin-binding Proteins AT2G36910 31.915 7.03e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3091 - K05666 gmx:100793361 2417.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3091 01 71580424 71588079 Dod01g3091 01 71580424 71588079 ECH