Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3088 ATGGAAACCAGCACGGCAATGGATGTGGAGGAACACCCTTCACCCAGCCCCAACAACCACAAACGTTTCGGCCTTAAAAACTCTATTCAAACCAACTTCGGCGACGACTATGTCTTCCAAATCGTCCCAAAGGATGATTGGAGTGCAATGGCGGTGTCACTGTCAGCGAACTCAGTGAAGCTGTATTCACCAGTGGCGGGTCAATATTTTGGAGAGTGCAAGGGTCACTCTGCAACCATCAACCAGATTCTGTTTTCGGGTCCTAGCAATCCCCATGTTTTGAGCTCTTGTTCCTCTGATGGCACTGTTAGAGCTTGGGACACAAGAACATATCAGCAGGTTTCTTCCATTAATGCTGGTCCTTCTCAAGAGGTCTTCAGCTTCTCTTATGGAGGGCCTGGTGGAAATTTGTTGGCTGCTGGCTGTAAATCGCAGATACTCTTCTGGGATTGGAGAAATAAGAAGCAAATTGCGCGCCTTGAAGATTCTCATGTGGATGATGTTACCCAGGTTCAATTTGTCCCTGATGAGCAAGGCAAGCTTATTTCTTCTTCAGAAGATGGGTTGATCTGCACGTTTGATACCACTGGAGATATCAATGATGATGATCATCTAGAATCAGTGATTAATGTGGGTACATCAATTGCAAAGGTGGGGATATTTGGAGGGAGTAGTCAGAAGCTTTGGTGTTTGACGCATATTGAAACCCTGGGTATCTGGGACTGGAAAAATGGTCGAAATGAAGTTAACTTCTCGGATGCTCGTACTTTGGCTTCTGAAAATTGGAATTTGGATCAGATTGACTATTTTGTTGATTGTCATTACTGCAGAGAAGCTGAAAAATTATGGGTGATTGGTGGCACTAATGCTGGTACTTTGGGCTACTTCCCTGTAAATTACAAAGGAATGGCAACAATTGGAGCTGCAGAAGCAATTCTTGAGGGTGGCCATACAGGTATTATTAGGAGTGTGTTACCCATGTCAAGATTTCATAGTGGAGCAGCTCCTAGTTCTAGCCCTGGCATTTTTGGATGGACTGGTGGGGAAGATGGCCGGTTATGCTGTTGGCTGTCTGATGATTCCCCACAAATAAAACAATCCTGGATCTCAAGCACATTGATTATGAAACCAGAAAAAAATCGCAAGAAAAGTCGGCATCGCCCCTACTAG 1170 0.4479 METSTAMDVEEHPSPSPNNHKRFGLKNSIQTNFGDDYVFQIVPKDDWSAMAVSLSANSVKLYSPVAGQYFGECKGHSATINQILFSGPSNPHVLSSCSSDGTVRAWDTRTYQQVSSINAGPSQEVFSFSYGGPGGNLLAAGCKSQILFWDWRNKKQIARLEDSHVDDVTQVQFVPDEQGKLISSSEDGLICTFDTTGDINDDDHLESVINVGTSIAKVGIFGGSSQKLWCLTHIETLGIWDWKNGRNEVNFSDARTLASENWNLDQIDYFVDCHYCREAEKLWVIGGTNAGTLGYFPVNYKGMATIGAAEAILEGGHTGIIRSVLPMSRFHSGAAPSSSPGIFGWTGGEDGRLCCWLSDDSPQIKQSWISSTLIMKPEKNRKKSRHRPY* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3088 389 SMART WD40_4 153 194 IPR001680 GO:0005515
Dod01g3088 389 SMART WD40_4 66 107 IPR001680 GO:0005515
Dod01g3088 389 SMART WD40_4 110 150 IPR001680 GO:0005515
Dod01g3088 389 Gene3D - 124 232 IPR015943 GO:0005515
Dod01g3088 389 Gene3D - 41 123 IPR015943 GO:0005515
Dod01g3088 389 ProSiteProfiles Trp-Asp (WD) repeats profile. 73 116 IPR001680 GO:0005515
Dod01g3088 389 SUPERFAMILY WD40 repeat-like 35 365 IPR036322 GO:0005515
Dod01g3088 389 Pfam WD domain, G-beta repeat 68 107 IPR001680 GO:0005515
Dod01g3088 389 ProSitePatterns Trp-Asp (WD) repeats signature. 94 108 IPR019775 -
Dod01g3088 389 PANTHER UNCHARACTERIZED 21 389 IPR039328 -
Dod01g3088 389 MobiDBLite consensus disorder prediction 1 23 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3088 K24758 - gmx:100794786 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3088 01 71555342 71559148 Dod01g3088 01 71555342 71559148 ECH