Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3087 ATGCTTCCTCTTTCGCTTCTCAAGACTGCCCAAGGCCACCCTATGCTGGTGGAACTGAAGAATGGGGAGACTTATAACGGCCATTTGGTTAATTGCGATACATGGATGAACATCCATCTCCGAGAGGTCATTTGCACCTCTAAAGACGGAGACAGATTTTGGAGGATGCCGGAATGCTACATAAGAGGCAATACAATTAAGTACCTTCGAGTTCCCGATGAGGTTATTGACAAAGTTCAGGAAGAAACCAAGAGCCGTGCTGATCGCAAACCACCTGGTGTGGGTCGTGGAAGGGGAAGAGGAAGGGAGGATGGTGGGGCTGGTGGGTGCCAAGCGAAAGGGGTCGGGCGTGGTCTCGATGATGGTGGTGCTAAGGGAGCTGGAGGAGGCCGAGGCAGGGGTGGCCCTAGTGGAAAGCCTGGTGGAAACAGAGGTAAAACATCCCTTACATCCCCCGAGAATGCGCTTATTGCGTGTTTACCAACTGTTCATATGTTATTTTCTATCCCTCACTTTCCGAATATTACGCTTTATTTTCACCTAGAGACTAGCTCTTGA 558 0.5 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGRGREDGGAGGCQAKGVGRGLDDGGAKGAGGGRGRGGPSGKPGGNRGKTSLTSPENALIACLPTVHMLFSIPHFPNITLYFHLETSS* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3087 185 MobiDBLite consensus disorder prediction 80 149 - -
Dod01g3087 185 Pfam LSM domain 6 70 IPR001163 -
Dod01g3087 185 CDD LSm4 2 77 IPR034101 GO:0000398|GO:0000956
Dod01g3087 185 PANTHER SM-LIKE PROTEIN LSM4 1 139 - -
Dod01g3087 185 SUPERFAMILY Sm-like ribonucleoproteins 3 133 IPR010920 -
Dod01g3087 185 MobiDBLite consensus disorder prediction 80 103 - -
Dod01g3087 185 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 1 139 IPR027141 GO:0006396
Dod01g3087 185 SMART Sm3 5 71 IPR001163 -
Dod01g3087 185 Gene3D - 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3087 Dod-Chr1 71551613 71554912 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3087 K12623 - gmx:100795851 213.772