Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3086 ATGGAGACGATGAGTCATTGTTCAAGGTTCCTTCTTCCATGTACGGAGAACCTCAACAACAATGGTCCTCCTTCTTCTGTGAGCTACGCGCTTGTTGTTCTGAATCAAGGCCTCCCAAAATTTGCTCCTCTGCTTTGGGCCCACGCACAGGTGCGAGTTTGCGCGGATGGAGGTGCCAATCGGGTGTATGATGAAATGCCCCTTCTCTTCCCTCTTCTAGATCCTTCCCATGTTCGCTCCAGGTACAAGCCCGATGTAATCAAAGGTGACATGGATTCAATCAGGACAGAAGTGCTTGATTTCTATACAAAGCTGGGAACTAAGATAATTGATGAGTCTCATGATCAGGATACCACAGATTTGCACAAATGCGTAGCATACATATGTCACCTTGCACCAAATATTGATAAATCAGTACTATGCATTCTTGTTGCTGGAGCACTTGGTGGGAGATTTGACCATGAGATGGGAAATATTAATGTGCTGTGCCGATTCTCCAACACACGAATTATCCTTCTATCTGATGACTGCCTTATTCGGCTTCTTCCAAAGAATCACTGTCATGAGATCTTTATTCAATCTTCTGTTGAGGGTCCGCATTGTGGACTCATTCCCATTGGGATGCCATCTGGAAGTTCTACAACCACCGGACTCCAGTGGGACCTCAATGACATGGAGATGAGATTTGGAGGTTTAATAAGCACATCAAACATTATAAAAGAAGATATTGTAACAGTACAGTCTGATTCAGATCTTCTTTGGACTATTTCCATCAAGAAGGCCTAG 786 0.4402 METMSHCSRFLLPCTENLNNNGPPSSVSYALVVLNQGLPKFAPLLWAHAQVRVCADGGANRVYDEMPLLFPLLDPSHVRSRYKPDVIKGDMDSIRTEVLDFYTKLGTKIIDESHDQDTTDLHKCVAYICHLAPNIDKSVLCILVAGALGGRFDHEMGNINVLCRFSNTRIILLSDDCLIRLLPKNHCHEIFIQSSVEGPHCGLIPIGMPSGSSTTTGLQWDLNDMEMRFGGLISTSNIIKEDIVTVQSDSDLLWTISIKKA* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3086 261 Pfam Thiamin pyrophosphokinase, vitamin B1 binding domain 188 253 IPR007373 GO:0009229|GO:0030975
Dod01g3086 261 Gene3D - 170 260 - -
Dod01g3086 261 PANTHER THIAMINE PYROPHOSPHOKINASE 1 2 259 - -
Dod01g3086 261 Pfam Thiamin pyrophosphokinase, catalytic domain 44 170 IPR007371 GO:0004788|GO:0005524|GO:0009229
Dod01g3086 261 Gene3D Thiamin pyrophosphokinase, catalytic domain 27 169 IPR036759 GO:0004788|GO:0005524|GO:0009229
Dod01g3086 261 PIRSF TPK1 4 261 IPR016966 GO:0004788|GO:0005524|GO:0009229
Dod01g3086 261 SUPERFAMILY Thiamin pyrophosphokinase, catalytic domain 26 178 IPR036759 GO:0004788|GO:0005524|GO:0009229
Dod01g3086 261 SUPERFAMILY Thiamin pyrophosphokinase, substrate-binding domain 181 260 IPR036371 GO:0009229
Dod01g3086 261 TIGRFAM thi_PPkinase: thiamine pyrophosphokinase 31 256 IPR006282 GO:0004788|GO:0006772
Dod01g3086 261 SMART TPK_B1_binding_a_2_a 186 252 IPR007373 GO:0009229|GO:0030975
Dod01g3086 261 CDD TPK 30 256 IPR007371 GO:0004788|GO:0005524|GO:0009229
Dod01g3086 261 PANTHER THIAMIN PYROPHOSPHOKINASE 2 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3086 Dod-Chr1 71546593 71549229 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3086 K00949 - gmx:100795320 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3086 01 71546593 71549229 Dod01g3086 01 71546593 71549229 ECH