Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3084 ATGTTAGAAAAGTGTTTTGGGGCTCAAAGGGCGAGGAGGTTCCACAGAGCACTCGGGCATTGCAAGGTCACGATCCTCTGCTTCGTCCTCACCATCGTTGTCCTGCGCGGCACCATCGGCGCCGGAAAATTCGGCACGCCGGAGCAGGACTTCAACGACATCCGCACCCACATATTCCCCCGCAAGCTCTCCGAGCCCCACCGCGTTCTCGTCCAGCTTCATCCCACGACGCCGTTTTCTTCCTCTGTTTCTCGTAGCTCTTCCACCACCAATTACAACGCCTTCGACATCAACACCATATTGTACGACGAAGACGAAGAAGAAGAATACCACAAATCCGACCCGCATAATCGTTATAGTCTCGGACCCAAAATATCGGATTGGGATGAACAGAGAGCCACGTGGCTCCGTGAGAACCCCAGTTTCCCAAATTTCATTCGCCCCAACAAGCCTCGTGTGCTTCTGGTAACTGGGTCTTCCCCCAAACCCTGTGAAAACCCAGTTGGTGATCACTATCTGTTGAAGTCCATAAAGAACAAGATGGATTATTGTCGCTTGCATGGCATTGAGGTTTTCTACAACATGGCACTTTTGGATGCTGAGATGGCAGGGTTCTGGGCTAAGCTTCCATTGATTAGGAAGCTTCTGTTGTCACACCCTGAGGTTGAGTTCCTGTGGTGGATGGACAGTGATGCAATGTTCACGGACATGGCCTTTGAGTTGCCATGGGAGAGGTACAAGGACTGTAATTTGGTGATGCATGGTTGGGATGAGATGGTTTATGATCAGAAGAATTGGATTGGGTTGAACACTGGGAGCTTCTTGTTGAGGAATTGCCAGTGGTCTTTGGATCTTCTTGATGCTTGGGCTCCAATGGGACCAAAAGGGAAAGTTAGGGATGAGGCTGGGAAAGTGCTCACACGTGAGCTTAAGGATAGGCCTGTTTTTGAAGCTGATGATCAATCAGCTATGGTTTATTTGCTTGCAAAAGAGAGGGAAGAGTGGGGTAACAAGGTTTATCTTGAGAATGGTTATTACTTGCATGGTTATTGGGGTATTTTGGTTGATAGGTATGAGGATATGATTGAGAATTACCATCCTGGCCTTGGTGACCATAGGTGGCCTTTGGTGACTCATTTTGTTGGTTGCAAGCCTTGTGGGAAGTTTGGGGATTACCCGGTTGAGAGGTGCTTGAAGCAAATGGATAGGGCTTTCAATTTTGGGGATAACCAGATACTGCAGATTTATGGGTTCACCCACAAGTCATTGGGTAGTAGGAGGGTTAAAAGAGTAAGGAATGAGACTATCAATCCTCTTGAGGCCAAAGACGAATTTGGCTTGCTTCATCCGGCATTTAAAGCAGTGGAGGTATCATCATCCTAG 1383 0.4808 MLEKCFGAQRARRFHRALGHCKVTILCFVLTIVVLRGTIGAGKFGTPEQDFNDIRTHIFPRKLSEPHRVLVQLHPTTPFSSSVSRSSSTTNYNAFDINTILYDEDEEEEYHKSDPHNRYSLGPKISDWDEQRATWLRENPSFPNFIRPNKPRVLLVTGSSPKPCENPVGDHYLLKSIKNKMDYCRLHGIEVFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFELPWERYKDCNLVMHGWDEMVYDQKNWIGLNTGSFLLRNCQWSLDLLDAWAPMGPKGKVRDEAGKVLTRELKDRPVFEADDQSAMVYLLAKEREEWGNKVYLENGYYLHGYWGILVDRYEDMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQILQIYGFTHKSLGSRRVKRVRNETINPLEAKDEFGLLHPAFKAVEVSSS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3084 460 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 4 459 IPR008630 GO:0016021|GO:0016757
Dod01g3084 460 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 149 313 IPR029044 -
Dod01g3084 460 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE-RELATED 4 459 - -
Dod01g3084 460 Pfam galactosyl transferase GMA12/MNN10 family 150 389 IPR008630 GO:0016021|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3084 Dod-Chr1 71517735 71519699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3084 1 460 Glycosyltransferase AT3G62720 78.525 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3084 K08238 - gmx:100794266 846.269