LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod01g3079	ATGGCGACCGTAATCGACGGCAAGGCCGTGGCTCAAACTATCCGATCTGAAATCGCGGAGGAGGTGCGCGCCCTCTCTCAGAAATACGGCAAGGTTCCAGGGCTGGCAGTGGTGATAGTAGGGAACAGGAAGGACTCGCAGAGCTATGTCGGGATGAAGAGAAAGGCCTGCGCTGAATTAGGGATCACTTCCTTCGACATTGACCTCCCCGAACAAGTTTCCCAAGCTGATTTGATCAAACAAGTTCATCAGTTGAATGCTAACCCTCATGTACATGGTATATTGGTTCAGCTTCCGTTGCCAAAGCATATAAATGAAGAGACAGTTTTGAGTGAAATCAGCCTTGAGAAGGATGTAGATGGCTTCCATCCTCTGAACATTGGCAAGCTTGCAATGAAAGGCAGAGATCCCCTCTTCCTTCCTTGCACTCCCAAGGCATGTATTGAACTTTTATCCCGAAGTGGTGTAAGTATAAAGGGAAAGAAGGCAGTTGTGGTTGGTAGAAGTAACATAGTTGGATTACCAGCTTCGTTGCTGCTTTTGAAAGCAGATGCTACTGTTACCATTGTCCATTCCCACACAAGTCAGCCAGAAAGTATCATACGTGAAGCAGACATTGTTATTGCAGCAGCAGGACAGCCAATGATGATCAAGGGTAGTTGGATCAAACCCGGAGCTGCAGTCATAGATGTTGGCACTAATGCTGTCGATGACCCGACCAGGAAGTCCGGTTACAGGCTAGTTGGAGATGTAGATTTTGAGGAAGCATCTAAAGTTGCTGGTTGGATTACTCCAGTTCCCGGTGGCGTGGGTCCAATGACGGTCACAATGTTACTGCATAATACTTTGGAGGGTGCCAAGCGCTGCTTTGAGCAAAATCACTGA	885	0.4768	MATVIDGKAVAQTIRSEIAEEVRALSQKYGKVPGLAVVIVGNRKDSQSYVGMKRKACAELGITSFDIDLPEQVSQADLIKQVHQLNANPHVHGILVQLPLPKHINEETVLSEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKACIELLSRSGVSIKGKKAVVVGRSNIVGLPASLLLLKADATVTIVHSHTSQPESIIREADIVIAAAGQPMMIKGSWIKPGAAVIDVGTNAVDDPTRKSGYRLVGDVDFEEASKVAGWITPVPGGVGPMTVTMLLHNTLEGAKRCFEQNH*	295

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod01g3079	294	Pfam	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain	5	120	IPR020630	GO:0004488
	Dod01g3079	294	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	122	287	IPR036291	-
	Dod01g3079	294	Pfam	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain	123	288	IPR020631	GO:0004488
	Dod01g3079	294	Gene3D	-	5	266	-	-
	Dod01g3079	294	Gene3D	Leucine Dehydrogenase, chain A, domain 1	7	284	-	-
	Dod01g3079	294	SUPERFAMILY	Aminoacid dehydrogenase-like, N-terminal domain	1	121	IPR046346	-
	Dod01g3079	294	ProSitePatterns	Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1.	75	100	IPR020867	GO:0003824
	Dod01g3079	294	PRINTS	Tetrahydrofolate dehydrogenase/cyclohydrolase family signature	246	262	IPR000672	GO:0004488
	Dod01g3079	294	PRINTS	Tetrahydrofolate dehydrogenase/cyclohydrolase family signature	33	55	IPR000672	GO:0004488
	Dod01g3079	294	PRINTS	Tetrahydrofolate dehydrogenase/cyclohydrolase family signature	74	101	IPR000672	GO:0004488
	Dod01g3079	294	PRINTS	Tetrahydrofolate dehydrogenase/cyclohydrolase family signature	109	130	IPR000672	GO:0004488
	Dod01g3079	294	PRINTS	Tetrahydrofolate dehydrogenase/cyclohydrolase family signature	205	234	IPR000672	GO:0004488
	Dod01g3079	294	PRINTS	Tetrahydrofolate dehydrogenase/cyclohydrolase family signature	263	281	IPR000672	GO:0004488
	Dod01g3079	294	PRINTS	Tetrahydrofolate dehydrogenase/cyclohydrolase family signature	156	176	IPR000672	GO:0004488
	Dod01g3079	294	PANTHER	C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED	1	292	-	-
	Dod01g3079	294	PANTHER	C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC	1	292	-	-
	Dod01g3079	294	ProSitePatterns	Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2.	267	275	IPR020867	GO:0003824
	Dod01g3079	294	CDD	NAD_bind_m-THF_DH_Cyclohyd	116	287	IPR020631	GO:0004488
	Dod01g3079	294	Hamap	Bifunctional protein FolD [folD].	2	290	IPR000672	GO:0004488

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod01g3079	Dod-Chr1	71494929	71497716	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod01g3079	-		-	ahf:112756387	548.125

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dod01g3079	01	71494929	71497716	Dod01g3079	01	71494929	71497716	ECH