Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3074 ATGGCAACCCTTTCTGCTTGCGCCTCACCACCATGGCCAAACCCTAACCCTAATCCCAATCCCAATCCCAATTCCGACCCCAATTTCCACCCCGACCAATCCCAAACCCTCGACTTCGATTCCCTAATGCCACCCCAACCTCAATCCCCGCCTCACCACACCGCTTCGCCGGGATCCTCCTCCCCCTCCGGTGAAGCTCCGGCGCAGCTGCCGCCGTCGCTCCTCCATCTCTCCTTCAACCAGGACCACGCCTGCTTCGCCGCTGCCACCGACAACGGCTTCCGCATCTACAACTGCGACCCGTTCCGGGAGCTCTTCCGCCGCGAGTTCGACGGCGGAGGGATCGGCCACGTGGAGATGCTCTTCCGGTGCAACATCCTGGCACTCGTTGGCGGAGGTTCACACCCTCAGTACCCTCCGAACAAGGTCATGATCTGGGACGACCACCAGGGGAGATGCATCGGCGAGCTCTCGTTCCGCGCCGGCGTGCGTGGCGTGCGGCTCCGCCGCGACCGGATTATCGTTGTGGTGGAGCAGAAGGTCTTCGTGTACAACTTCGCGGACCTGAAGCTGCTGCACCAGATCGAGACCGTGGCGAACCCTAAGGGTCTCTGCGCGGTTTCGCATTCGTCGGATTCGCTGGTGCTTGCGTGCCCTGGGTTGATCAAGGGCCAGATTCGCGTGGAGCACTATGCGCAGAAGAAGACGAAGATCATCTCCGCGCACGATTCGAGGATCGCTTGTTTTGCTCTCACGCTCGATGGGCAGTTAATCGCCACAGCGAGCAGCAAGGGCACGCTGATAAGGGTTTTTGATACGGACAGTGGCACGCTGCTTCAGGAAGTAAGAAGGGGTGCAAACCCAGCAGAGATCTTTAGTTTGGCATTCTCTTCTACTGCCCAGTGGCTAGCTGTTTCAAGTGACAAGGGAACTGTCCATGTGTTCAGCCTTAAGGTTAATGGCAATGTCCCTGAACATGAAAAGTCACAAAGTTCATCCAATTCAGATGCTGCCATTACCCCATCTAGCTCATCTCGCTCATTCATCAAATTCAAGGGAGTGTTGCCTAAGTATTTCAATTCAGAGTGGTCGGTTGCTCAGTTTCACTTACAAGAGGGCTCTCATTATGCAGTTGCATTTGGTATCCAAAAGAATACAGTTGTAATTCTTGGTATGGATGGAAGCTTCTATCGATGTCAATTTGATCCAGGGCATGGTGGGGAGATGACCCAGCTGGAATACCAAAACTTTTTGAAGCCAGAAACAACCTTGTGA 1275 0.5498 MATLSACASPPWPNPNPNPNPNPNSDPNFHPDQSQTLDFDSLMPPQPQSPPHHTASPGSSSPSGEAPAQLPPSLLHLSFNQDHACFAAATDNGFRIYNCDPFRELFRREFDGGGIGHVEMLFRCNILALVGGGSHPQYPPNKVMIWDDHQGRCIGELSFRAGVRGVRLRRDRIIVVVEQKVFVYNFADLKLLHQIETVANPKGLCAVSHSSDSLVLACPGLIKGQIRVEHYAQKKTKIISAHDSRIACFALTLDGQLIATASSKGTLIRVFDTDSGTLLQEVRRGANPAEIFSLAFSSTAQWLAVSSDKGTVHVFSLKVNGNVPEHEKSQSSSNSDAAITPSSSSRSFIKFKGVLPKYFNSEWSVAQFHLQEGSHYAVAFGIQKNTVVILGMDGSFYRCQFDPGHGGEMTQLEYQNFLKPETTL* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3074 424 SMART WD40_4 48 98 IPR001680 GO:0005515
Dod01g3074 424 SMART WD40_4 275 316 IPR001680 GO:0005515
Dod01g3074 424 SMART WD40_4 232 272 IPR001680 GO:0005515
Dod01g3074 424 MobiDBLite consensus disorder prediction 10 26 - -
Dod01g3074 424 PANTHER WD REPEAT PHOSPHOINOSITIDE-INTERACTING-LIKE PROTEIN 25 423 - -
Dod01g3074 424 MobiDBLite consensus disorder prediction 53 67 - -
Dod01g3074 424 MobiDBLite consensus disorder prediction 27 43 - -
Dod01g3074 424 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 25 423 - -
Dod01g3074 424 SUPERFAMILY WD40 repeat-like 70 325 IPR036322 GO:0005515
Dod01g3074 424 Gene3D - 67 404 IPR015943 GO:0005515
Dod01g3074 424 MobiDBLite consensus disorder prediction 1 71 - -
Dod01g3074 424 Pfam WD domain, G-beta repeat 285 315 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3074 Dod-Chr1 71455058 71458212 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3074 K22991 - gmx:100781692 699.893