Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3050 ATGTTGACTGCTGACAAGCCAGTGGTGATCTTCAGCAAGAGCACTTGCTGCATGAGCCATACAGTGAAGGCTCTGATATGCAGCTTTGGTGCCAACCCTGCAGTGATTGAGGTTGACAAGCTGCCAAATGGACAGCAAGTGGAGAGGGCACTGGTCCAGCTTGGTAGCCGCCCAACTGTGCCAGCAGTGTTCATAGGACAGCAATTCATAGGAGGTGCTGATGAACTCATAAGCCTCAATGTTCAAAACAAGCTTGCCCAATTGCTTCTTAATGCTAGAGCTATATTTATCTGGGGTAGGTAG 303 0.4884 MLTADKPVVIFSKSTCCMSHTVKALICSFGANPAVIEVDKLPNGQQVERALVQLGSRPTVPAVFIGQQFIGGADELISLNVQNKLAQLLLNARAIFIWGR* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3050 100 Gene3D Glutaredoxin 1 97 - -
Dod01g3050 100 CDD GRX_GRXh_1_2_like 7 88 - -
Dod01g3050 100 ProSiteProfiles Glutaredoxin domain profile. 1 96 - -
Dod01g3050 100 PANTHER GLUTAREDOXIN 2 100 IPR011905 -
Dod01g3050 100 TIGRFAM GlrX-like_plant: glutaredoxin-like family 2 96 IPR011905 -
Dod01g3050 100 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 2 100 - -
Dod01g3050 100 SUPERFAMILY Thioredoxin-like 4 94 IPR036249 -
Dod01g3050 100 Pfam Glutaredoxin 8 70 IPR002109 -
Dod01g3050 100 PRINTS Glutaredoxin signature 67 80 IPR014025 -
Dod01g3050 100 PRINTS Glutaredoxin signature 8 26 IPR014025 -
Dod01g3050 100 PRINTS Glutaredoxin signature 53 66 IPR014025 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3050 Dod-Chr1 71212863 71213165 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3050 2 97 Miscellaneous Gene Families AT4G15690 47.917 1.01e-31 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3050 K03676 - gmx:100803979 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0464 07 6153657 6154147 Dod01g3050 01 71212863 71213165 PCT