Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3049 ATGGAAGTGGTCACAAGCATGGTAGCTGAGAGGCCAGTGGTGATATTCAGCAAGAGCACATGTTGCTTGAGCCACTCCATGACATCGCTAATACGCAGCTTTGGTGCCAACCCCACAGTTTATGAGCTTGATGAGATTACAAATGGGAAGCAGATTGAGAATGCATTGCTTCAAATGGGGAGCCAACCAAGTGTGCCAGCTGTGTTCATTGGACAACAGTTCATAGGTGGCTCTAAAAGAATCATGAGCCTGCATGTCCGGAATGAGTTAGTACCACTGCTGAAGAATGCCAAGGCTATTTGGGTTTGA 309 0.4693 MEVVTSMVAERPVVIFSKSTCCLSHSMTSLIRSFGANPTVYELDEITNGKQIENALLQMGSQPSVPAVFIGQQFIGGSKRIMSLHVRNELVPLLKNAKAIWV* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3049 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Dod01g3049 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Dod01g3049 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Dod01g3049 102 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 101 - -
Dod01g3049 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Dod01g3049 102 Pfam Glutaredoxin 13 75 IPR002109 -
Dod01g3049 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Dod01g3049 102 SUPERFAMILY Thioredoxin-like 2 101 IPR036249 -
Dod01g3049 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 102 IPR011905 -
Dod01g3049 102 CDD GRX_GRXh_1_2_like 12 93 - -
Dod01g3049 102 Gene3D Glutaredoxin 2 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3049 Dod-Chr1 71208851 71209460 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3049 1 102 Miscellaneous Gene Families AT4G15700 53.922 1.05e-41 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3049 K03676 - gmx:100811394 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3049 01 71208851 71209460 Dod01g3049 01 71208851 71209460 ECH
Dod01g3049 01 71208851 71209460 Dod07g0464 07 6153657 6154147 PCT
Dod07g0465 07 6164048 6164564 Dod01g3049 01 71208851 71209460 PCT