Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3045 ATGGCTGAAGGAGAGGATCGTATTGAGCTTAAATTCCGCATATATGATGGAACCGATATAGCACACAGTACTTATTCATCGTCTACTACAGTCGGTACCCTTAAGCAAAGGCTGATCGCTGAGTGGCCTCAAGGCAAAACAGTTACACCAAAGTCATTAAGTGACGTAAAACTTATTCATGCTGGTAAAGTTTTGGAAAACAGCAAAACTCTTGCTGACTCCAGAATACCTTTTGGTGACATTCCTGGGGGTGCTATTACCATGCATGTTGTAGTACAGCCTCCAGTGGCTAAAAAGAAGACAGGTTCGTTCAATCTGTTCATATATGCTTTTGCTGAACCATATAGGTTGCATGGACTGGCTTGTACTTGA 372 0.422 MAEGEDRIELKFRIYDGTDIAHSTYSSSTTVGTLKQRLIAEWPQGKTVTPKSLSDVKLIHAGKVLENSKTLADSRIPFGDIPGGAITMHVVVQPPVAKKKTGSFNLFIYAFAEPYRLHGLACT* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3045 123 ProSiteProfiles Ubiquitin domain profile. 8 76 IPR000626 GO:0005515
Dod01g3045 123 CDD Ubl_MUBs_plant 8 95 - -
Dod01g3045 123 PIRSF MUB 1 105 IPR017000 -
Dod01g3045 123 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 102 IPR039540 -
Dod01g3045 123 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 102 - -
Dod01g3045 123 SUPERFAMILY Ubiquitin-like 4 98 IPR029071 -
Dod01g3045 123 Gene3D - 1 101 - -
Dod01g3045 123 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 102 IPR040015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3045 Dod-Chr1 71171823 71174938 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3045 - - gmx:100785440 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3045 01 71171823 71174938 Dod01g3045 01 71171823 71174938 ECH