Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3042 ATGGGTAGCGAGTCGAAGGCGAGCGTAATGGATGGAGTTCACAGCGATGTGAAGGTGGTGGAGAGGCCAACGAGGGTGAGGCCTTACGACGTGTTTCTCAGATTTCTAGGGCTCTCGCTCACTCTTGTGGCGACCATCATTGTGGGTGTTGGCAAGGAGACTACGATCATCTCCTACGCTGGAATGCACCTAGAAGCCACTGCTAAGTGGCAATACATGTCTGCTACTGTGTTTTTTTTGGTGTCAAACGCTATAGCATGCTCATATGCAGCAGCATCATTGGTGTTCTCGGCGATGGCAAGAAGCAGTGGGAATTACAATGTGGCAGTGTTGGGTCTAACCATAGCAGACCTGTTAATGGTGGCACTTCTCTTCTCAGCCAATGGGGCAGCTTTTGCAGTGGGACTGATCGGAAAGAATGGGAACTCTCACGTTCAGTGGATGAAAGTGTGCAATGTGTTCGATGCCTACTGTCGCCACATGACCGCAGCTTTGGCCCTCTCTCTCATTGGCTCAATTGTCTTTCTTTTGATGGTTGTCCACTCTCTTGTCAAACTCCATTACAAGTCATCAAGCAGCTAG 582 0.4966 MGSESKASVMDGVHSDVKVVERPTRVRPYDVFLRFLGLSLTLVATIIVGVGKETTIISYAGMHLEATAKWQYMSATVFFLVSNAIACSYAAASLVFSAMARSSGNYNVAVLGLTIADLLMVALLFSANGAAFAVGLIGKNGNSHVQWMKVCNVFDAYCRHMTAALALSLIGSIVFLLMVVHSLVKLHYKSSSS* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3042 193 Pfam Casparian strip membrane protein domain 26 173 IPR006702 -
Dod01g3042 193 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 10 190 - -
Dod01g3042 193 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 32 185 IPR006459 -
Dod01g3042 193 PANTHER CASP-LIKE PROTEIN 1E1 10 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3042 Dod-Chr1 71128333 71129837 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3042 - - gmx:100817307 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3042 01 71128333 71129837 Dod01g3042 01 71128333 71129837 ECH