Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3031 ATGGCTGATGCCTGCTACGCCTTTCGTTCTCCATCTCATTCTCAACCTTCATCGCCACAAGGAGATAAAGTCAAAGATGCTGATGAAGATGAGCAGTTTCAAGAGACAGAGCTCTTCGATGACACCTTAGTGCTTAATAGTCCCTTCACTGAGCCCCAAGTGGAAAATCTCAACCTGAACACTGAGCTTGTGGAGGACTCGGACCATGAAGAGAACATGAAAAGCAGTCCAACATGTGAGTATGGACATGAAGTGGTGCTTGATAGTGAGGATGAGGAAATTGATAATGGTGAGGCAGTACCTACTGCAAAAGGAGCACTTGATGATGCAACTAGTCCAACTGTAAGAATTCCTGCGATGCAGCTGCAGAAGAGACAGGTGAAGCCACCTTGTGAACAATCAGACTCAAATGCCGCCACTTTTAGGAAAGCTGCTACTGGGGACAAAGGAGTTTCAAGTGATGCCAAGAGATTTAATGACAACAATAATCTATGTCTACCTGCAAGGTTAAATCACATTAACTCACCAGAGGCTGCAGATTCAACTCAAGCTGCTCTTGGCTTTGTGGATCAGTTCTTGTCATCTGATGACATGGACTTGTTTCAAGGAATTAGTTATACAAAGGCTGCTAGAGAGAAATCATCTCATGTCTTGAGCGCTAGAGGATCACTAAGTTTAGCTAGAAAAATTAAATCTCCAACCCAAAGTGCAGAAAAAGAGCCCTTCAGATGGATTGGAAGTGATCAAAATGACAAAGGAGCTGATATCTTGTGTAAAAAGACCGACCCATTGACAAATTTTGGAAGCTACAGACAGAAATATGTGAGGAAAAGGCAGGAAGAAGGTAGCCATCTACAGAACCAAGGAGTATGCAGTACAGGTAATAGATGTGATAAGAACTTAGTCCAAAGCCCAGGAATAGCATCCGAAAATAATAACTCTTACAAGGAGTTGAATGTTCAGTCAAATGTTAATGCTTATTCCAGTGTGATACATACAGAAGAAATGTTTGATATTGGTTTAGATACTCAAATGGCTGCTGAAGCTATGGAGGCCTTAGCATTTGTGCCCCCTACTGGCTGCCATTTCAATGATGCTCGCCAACCTGAGAATGCAATTGATGGCTTTCTGAGTGATTTGACAAACAATGAAGCTCCTTCGAATAACTCCCCGCATAGACAGAACTCTGATTTACAGTCTATCACAAAATCAAAGAAGAGAAATGTCTCTTCCTGTAGTTTAAGTAAAGTAACTTCTAGTTCCTCCGCCAAGCACACTGAGAATCAGAAGCCAAATCCTGTCTCAAGTAAAATGCGAAAAATCATGAAAAGCAGGTCAACTGTTGAGGGAAAGTTTGAAAACGATACCAGTTTACCATACAGTGAACATGTCTCACTTGAAGAAGTTTGCTCAACTGGGGAGTATACAAGTTTTCAACCAGTTGCCAAAGAACCCAAAAATAGGACTAAGAGCAGATGGACAAGGATCAAAGATCAACCAAACCATCATACAGAGAGGAACAATAATGTCAAGGAAGAGAAAGGCACTATTAGTCACAAGAGGAAGGGGGCTGATTTAGTGGCTGATCCATTGAAGTTGGGTACTAGGACAAAACATCTCAATTTGCCTGCCAGTTTGTGCGGGAAGCCTAGCAAGAACAGGCTGAATCATCAGGTTCAAGTTAGTCCACAGCTATCAGCAACCAAAAGTTTTTTAATAAATGACTGGCATTATCCAAAAAGGGCAAGAGGGAAAAGAAGGCAAGCTAATGCGCAAAACAATCTTGATGCATCTAGCATTTTGTGCGTTCATGGAAAAGAAAGCGATGTCTATTCCACTAGAAGTCTAAAAGGCCAAGATGATGAGGATAAATCATGCGTTGACAAGGGCAGATGCTTGTTACGGGGGAACTCTGTTCAACCAATTTCAGCTGATGATGCCGTGAAATTTGAAAATCCCCATGATATGCATCCCTTATTGCTGGCACATGTTGAAATATCATCTAACAAGAGCAATGCACAATCAAGTTCGGAAATCCCGGCTACAATATCCTCAAGTAAAGGCATAAAAATTTCAAATGCTGATCATACATATGAGCATCACAAAAAGCCACCGGATAAAAACCTGCCAAAGTCTTCCCTTTTGAAAGAGCTTATCAGATTAGGAGTTTCTGAGCCCACATCAGGTCTGATATGTAAAGATCTGAGACAGAGGAGAGACGTGACATTTGTTCGAGTTCTGTTTAGCCAGCATTTGGATGACAGCATTGTCAAGCAGCAAAAAAAGATCTTGGCACGTCTCAATATATCTACTGCATCAAGTTCAATGGAGGCCACACATTTCATAGCAGACAAATTTACACGTACAAAGAATATGTTGGAAACAATGGCTCTTGGTAAATTAGTGGTGACACACTCATGGCTTGAGAGCTGTGGGCAAGCCAACTCTTTTATTGATGAGAAAAACTACATTTTGAGGGATGTGAAGAAGGAAAAGGAGATAGGCTTCAGCATGCCTGTTTCTCTAGCTCGAGCAAGACAGACACCACTCTTGAAGGGTAAAAGAGTCTACATCACGCCACACATTAAACCTGATAAGGAAGTAGTCGCAAGCTTGGTCAGGGCTGTTCGTGGCCAGGTGGTTGATGAAAGACAGATACATGCAGACAAGAATGACAAGAGCTTAAATGATCTGTTGATTCTTTCTTGTGAAGAGGACTATGGGATATGCCGCCCTTTCGTTAAGAGAGGAGCTGCTGTTTACAGTTCAGAGCTTCTCCTGAATGGAATTGTTATCCAGAAACTGGAACTTGACAGACATCAACTCTTCGTGAGTCAAGCTACAAGAAATGGCCCACGTACGTCTGATCGGTTTGGGAAGGTTTACAGAAGGCGTTAG 2898 0.4203 MADACYAFRSPSHSQPSSPQGDKVKDADEDEQFQETELFDDTLVLNSPFTEPQVENLNLNTELVEDSDHEENMKSSPTCEYGHEVVLDSEDEEIDNGEAVPTAKGALDDATSPTVRIPAMQLQKRQVKPPCEQSDSNAATFRKAATGDKGVSSDAKRFNDNNNLCLPARLNHINSPEAADSTQAALGFVDQFLSSDDMDLFQGISYTKAAREKSSHVLSARGSLSLARKIKSPTQSAEKEPFRWIGSDQNDKGADILCKKTDPLTNFGSYRQKYVRKRQEEGSHLQNQGVCSTGNRCDKNLVQSPGIASENNNSYKELNVQSNVNAYSSVIHTEEMFDIGLDTQMAAEAMEALAFVPPTGCHFNDARQPENAIDGFLSDLTNNEAPSNNSPHRQNSDLQSITKSKKRNVSSCSLSKVTSSSSAKHTENQKPNPVSSKMRKIMKSRSTVEGKFENDTSLPYSEHVSLEEVCSTGEYTSFQPVAKEPKNRTKSRWTRIKDQPNHHTERNNNVKEEKGTISHKRKGADLVADPLKLGTRTKHLNLPASLCGKPSKNRLNHQVQVSPQLSATKSFLINDWHYPKRARGKRRQANAQNNLDASSILCVHGKESDVYSTRSLKGQDDEDKSCVDKGRCLLRGNSVQPISADDAVKFENPHDMHPLLLAHVEISSNKSNAQSSSEIPATISSSKGIKISNADHTYEHHKKPPDKNLPKSSLLKELIRLGVSEPTSGLICKDLRQRRDVTFVRVLFSQHLDDSIVKQQKKILARLNISTASSSMEATHFIADKFTRTKNMLETMALGKLVVTHSWLESCGQANSFIDEKNYILRDVKKEKEIGFSMPVSLARARQTPLLKGKRVYITPHIKPDKEVVASLVRAVRGQVVDERQIHADKNDKSLNDLLILSCEEDYGICRPFVKRGAAVYSSELLLNGIVIQKLELDRHQLFVSQATRNGPRTSDRFGKVYRRR* 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3031 965 MobiDBLite consensus disorder prediction 377 454 - -
Dod01g3031 965 MobiDBLite consensus disorder prediction 1 30 - -
Dod01g3031 965 ProSiteProfiles BRCT domain profile. 762 825 IPR001357 -
Dod01g3031 965 Gene3D BRCT domain 848 949 IPR036420 -
Dod01g3031 965 Gene3D BRCT domain 734 846 IPR036420 -
Dod01g3031 965 CDD BRCT_MDC1_rpt1 744 818 - -
Dod01g3031 965 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 744 825 IPR001357 -
Dod01g3031 965 CDD BRCT_PAXIP1_rpt6_like 850 936 - -
Dod01g3031 965 SUPERFAMILY BRCT domain 744 841 IPR036420 -
Dod01g3031 965 PANTHER BRCT DOMAIN-CONTAINING PROTEIN-RELATED 16 950 - -
Dod01g3031 965 MobiDBLite consensus disorder prediction 377 441 - -
Dod01g3031 965 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 16 950 - -
Dod01g3031 965 MobiDBLite consensus disorder prediction 499 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3031 Dod-Chr1 71040116 71044930 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3031 - K14972 gmx:102659913 1184.09