Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3027 ATGATGCTCAGAATCCGAAGCCGCGACGGCCTGGAGCGAGTAGCCGTCGACAACCCGCACGCCACGGTGTCCCAACTAAAATCGCTTATCGAAACGCAGCTCGGAATCCCTTCCGAGAACCAAACGCTCTCCACCAACCAGAACCTCCTCCTCTCCAAGTCTCTCGAAGATCTCGACCGATTCACCGACATGTCCGACCCTAACGCCCCTCTCTCCTCCCTCGGCCTCTCCCACGGCTCCATCCTCTTCCTTTCCTATGGCGGAGAGCGCCGTGGCGTCCCCGGACCCCCCGCCGCCTTCAGCCCCGCCGGCTCCTTCGGCCGCAAGATGACAATGGACGACCTGATCGCCAAGCAGATGCGCGTCACTCGCCAGGAGAATCCCCACTGCGAGCTCGTCTCCTTCGACCGCGATTGCGCCAACGCCTTCCAGCACTATGTTAACGAAACCCTAGCCTTCGCCGTCAAGCGCGGCGGCTTCATGTACGGCACCGTCTCCGAGGAAGGGAAGGTCGAGGTGGACTTCATCTACGAGCCCCCCCAGCAGGGCTCCGAGGACAATTTGGTCTTTTTCAGGGACCCTGATGAGGAGAAGCTCGTTGAGGCCATTGCTGTTGGGTTGGGCATGAAGAAGGTTGGCTTCATATTCACGCAGACCATAACCCAGGACAAGAAGGACTATACTCTGTCGAATAGGGAGGTGCTTCAGGCAGCGGAGTTCCATGCGGAGAGCGGGTTGAAGGAGTGGGTCACTGCTGTGGTGAAGCTGGAGGTGAATGAGGATGGTATGGGTGCTGATGTGCATTTTGAGGCTTTTCAGATGAGTGATATGTGTGTTAGGTTGTTTAAGGAAGGGTGGTTTGAGACGGAGATTAAGGAGGAGGATGATCCCAAGTTGTCTAAGATGAAGAAGGAAGTGGTTGTTGGTGTAAAGGATACTAGAGAGGTTGACAATGATTTCTTCTTGGTCGTTGTCAAGATCTTTGATCATCAGGGTCCACTTACATCAGCATTCCCCATTGAGAACCGGAATACTCTAGCGACTATGAAGGCTCTGAAAAATCATCTTGAGCGGACAAAAAATCTTCCATTTGTGAAGCGAATTTCTGATTTTCATCTTCTTCTCGTGTTGGCAAGGGTTTTAGACCTGAATGCTGATGTTCCTGCATTGACAGAATGCGTGCAGACCCAAACTGCTGTACCAGAGGGTTACAAGATCCTTATTGAGTCCATGGCCAGTGCTGCTTGA 1248 0.5345 MMLRIRSRDGLERVAVDNPHATVSQLKSLIETQLGIPSENQTLSTNQNLLLSKSLEDLDRFTDMSDPNAPLSSLGLSHGSILFLSYGGERRGVPGPPAAFSPAGSFGRKMTMDDLIAKQMRVTRQENPHCELVSFDRDCANAFQHYVNETLAFAVKRGGFMYGTVSEEGKVEVDFIYEPPQQGSEDNLVFFRDPDEEKLVEAIAVGLGMKKVGFIFTQTITQDKKDYTLSNREVLQAAEFHAESGLKEWVTAVVKLEVNEDGMGADVHFEAFQMSDMCVRLFKEGWFETEIKEEDDPKLSKMKKEVVVGVKDTREVDNDFFLVVVKIFDHQGPLTSAFPIENRNTLATMKALKNHLERTKNLPFVKRISDFHLLLVLARVLDLNADVPALTECVQTQTAVPEGYKILIESMASAA* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3027 415 Pfam Nuclear pore localisation protein NPL4 1 85 IPR024682 -
Dod01g3027 415 Pfam NPL4 family 159 284 IPR007717 -
Dod01g3027 415 ProSiteProfiles MPN domain profile. 132 274 IPR037518 -
Dod01g3027 415 CDD Ubl_AtNPL4_like 1 85 - -
Dod01g3027 415 CDD MPN_NPL4 121 377 IPR007717 -
Dod01g3027 415 ProSiteProfiles Ubiquitin domain profile. 1 84 IPR000626 GO:0005515
Dod01g3027 415 PANTHER NUCLEAR PROTEIN LOCALIZATION 4 2 90 IPR016563 GO:0006511
Dod01g3027 415 PANTHER NUCLEAR PROTEIN LOCALIZATION 4 104 412 IPR016563 GO:0006511
Dod01g3027 415 SUPERFAMILY Ubiquitin-like 1 87 IPR029071 -
Dod01g3027 415 Gene3D - 1 99 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3027 K14015 - gmx:100811623 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3027 01 70986700 70991433 Dod01g3027 01 70986700 70991433 ECH