Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3021 ATGAACCCTTTCAGTGACAAAAACCGTGTCTTTCAGTTGCTGAAGCAGTGTCACCATTACAATTACCATCACCATTACCTGCAATGTCGTGGCATAGTGAAGGTTCGGCTCAAATGGGTGAAGAACCGAAGCCTGGACCACATCATCGACAAAGAAACCGACATGAAGGCCGCTTCCCTCCTCAAGGACGCCATCAACCGCTCCTCCACCGGCTTCCTCACCGAGAAGTCCGTCGCCGACTGGCAGAAGCTCCTCGGCCTCACCGTCCCCGTCCTCCGCTTCCTCCGCCGCTACCCCTCCCTCTTCCACGAGTTCCCCCACCCTCGCTGGCCCTCCCTCCCCTGCTTCCGCCTAACCGACACCGCCCTCTTCCTCCACTCCCTCGAGCAAGCCATCCACCAAAACCACGAGAGCGACGCCGTCGAGAGGCTCTCCAAGGCCCTCATGATGATGAGGACCAAATCGGCGCCGCTCCGCTCCCTCCAGCCCCTGAAATGGGACCTCGGCTTGCCCGATTGCTTCGAGAAAACCCTAGTCCCCAGATACCCCGAGCACTTCAAGTTCGTGAAGTACCCCACCGGTGACACCGGCTTGAAATTAGCGCAGTGGAACGAGGAATTCGCGGTTTCGGCGTTGCAGAGGATCAACGAAAACAGAAGAACGGGGAACAGCAGTGAGTACAGGGATTTCAAGAGAGGGCAAGCAGCGCTGGTTTTTCCGATGAGGTTTCCGCGGGGTTACGGAGCGCAGAAGAAGGTTAGGGCATGGATGGAGGAGTTCCAGAAGCTTCCTTACATCTCACCCTATGCGGATTGCAGCAAGGTTGATCCAAACAGTGACTTGATGGAGAAGAGGGTTGTTGGGGTTTTGCACGAGTTTTTAAGCTTGACTATTCACAAGAAAACAAAGAGGAACTACTTGAGAAGCTTGAGGGATGAGTTGAGGCTTCCGCATAAGTTTACCAGGATATTCACCAGGTATCCGGGGATATTTTACTTGTCTCTCAAGTGTAAGACTACCACTGTCACTCTTAGGGAAGGGTATCAGAGTGGGAAGCTGGTGGAGCCTCATCCTCTTGCTCTTCACAGGGATAAGTTCTACCATGTCATGAGGACTGGGCTTCTTTATCGTGCTAAAGGCGCCGAGTTGAAGCCTCCGGATGAAGAGCTAGAAGGCAATGGAGACTCTGAGGATGATGAGGTTGAAACAAGTGATGAGTTCTATGAGGATGAGGTTTCGGAGTCTGATTAA 1251 0.534 MNPFSDKNRVFQLLKQCHHYNYHHHYLQCRGIVKVRLKWVKNRSLDHIIDKETDMKAASLLKDAINRSSTGFLTEKSVADWQKLLGLTVPVLRFLRRYPSLFHEFPHPRWPSLPCFRLTDTALFLHSLEQAIHQNHESDAVERLSKALMMMRTKSAPLRSLQPLKWDLGLPDCFEKTLVPRYPEHFKFVKYPTGDTGLKLAQWNEEFAVSALQRINENRRTGNSSEYRDFKRGQAALVFPMRFPRGYGAQKKVRAWMEEFQKLPYISPYADCSKVDPNSDLMEKRVVGVLHEFLSLTIHKKTKRNYLRSLRDELRLPHKFTRIFTRYPGIFYLSLKCKTTTVTLREGYQSGKLVEPHPLALHRDKFYHVMRTGLLYRAKGAELKPPDEELEGNGDSEDDEVETSDEFYEDEVSESD* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3021 416 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 24 415 IPR045040 GO:0003723
Dod01g3021 416 Pfam Plant organelle RNA recognition domain 40 373 IPR021099 GO:0003723
Dod01g3021 416 MobiDBLite consensus disorder prediction 391 416 - -
Dod01g3021 416 MobiDBLite consensus disorder prediction 380 416 - -
Dod01g3021 416 PANTHER OS04G0546100 PROTEIN 24 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3021 Dod-Chr1 70941006 70947057 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3021 - - gmx:100808403 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3021 01 70941006 70947057 Dod01g3021 01 70941006 70947057 ECH
Dod01g3021 01 70941006 70947057 Dod07g0521 07 6881807 6885205 PCT