Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3015 ATGGCGGTTTCGGAGGAAGAGTGCTCTAAGCCAGGGCCCTCTTCGTGTCCTTCGTCCACAAAGCCCTATTACCTCTCCAAGTGCGTTCTCAGAGCCAGCGTCCTTCTTCACGTCCTCCACGGCCACATCCGTTCCCCCTCCTCCAACGACGTCGTTTTCGGCAAGGAGACATCTATAGAATTGGTGGTCATTGATGAGGATGGAATGGTACAATCTATATGTGATCAGCCTGTTTTTGGCACCATTAAAGATCTTGCAATATTGCGCTGGAACGCCCAATTTCATCAGCGGGATCCACAGATGCATGGTAAAGATTTGGTGGTTGCTTTATCTGATTCTGGGAAGTTGTCGTTCCTCACATTTTGCAATGAAATGCACAGGTTTTTCCCTGTAACACATTTTCAACTATCTAATCCTGGAAACACAAGGGATCTCCCTGGAAGAATGCTAGCGGTTGATTCCAGTGGTTGTTTCATTGCAGTCAGTGGATATGAAGATCGGCTGGCTCTATTTTCTGTGTCTGTGGCTGGCAATGATATCATTGATGAGAGGATAATATATCCTTGTGAAAGTGGAGGGACTGCAAGCACTTCCACAAGCAGCCATAGAACCAATATACGCGGTACAATTTGGAGCATATGCTTTGTTTCACAAGATTGCCGGCAACCAAGCAAGGAGCATAACCCTGTACTAGCTGTTGTTCTAAATAGGAGGGGAGCACTTCTAAATGAATTGATGCTATTGGAATGGAATATTACAGCACGTACAATCTCTGTTATTTCTCAATATGTTGAAGCAGGGCCTCTAGCATATAACATTGTTGAAGTTCCGAACTCTCATGGACTTGCATTTCTGTTCAGGGCTGGTGATGCTCTTTTAATGGATTTAAGTGATGCTCTCAAGCCATGTTGTCTCTGTAGGACTAGCTTAAACATCTTACCCAATGCCATGGAAGAGCAGACTTTTGTTGAGGACTCTTGTAAATTACAAGATGTTGATGATGAACGCTTTAATGTTGCTGCATGTGCTTTGTTGGAGCTTAGTGATTATGATCCTATGTGCATAGACAGTGACAATGCTGGTACTAATTCAGGTTACAAGTTTGTATGCTCATGGAGTTGGGAACCTGTAAATAATGAAGATCATAGGATGATATTCTCTTTAAATACTGGAGAAATTTTTATGATTGAGATTCTTGATTCTAATGATGGCCTTAAAGTTAATCTCTCTGAGTGTCTTTACAAAGGTCTACCATGTAAAGCACTTTTGTGGGTTGAAAGTGGATATCTAGCTGCCATTATAGAAATGGGAGATGGCATGGTCCTGAAATTGGAAGATGGAAGGCTATGCTATACAAATCCTATTCAAAATATTGCACCAATCTTGGATATGGCAGTTGTGGATTATCATGAGGAGAAGCATGATCAGGTGTTTGCTTGCTGTGGTGTGGCACCTGAGGGGTCACTAAGGATAATTCGAAGTGGTATCAGTGTAGAAAAGCTGACTAGGACTGCTCCTATATATCAAGGGGTATTTGGTGCTTGGACAGTTCGAATGAAAGTGACTGATTTGTATCATTCTTTTCTAGTTCTATCATTTGTTGAGCAGACTAGAATATTGTCAGTTGGCTTAAGTTTTACTGATGTGACTGATTCAGTTGGTTTCCAACCTAATGTCTGTACTTTGGCATGTGGCCTTTTGGGTGATGGTTTGCTTGTTCAGATCCACCGATCTACTGTTAGGCTTTGTTTGCCTACTCAGGCTGCTCATTCTGAAGGTATCTGTTTGTCCTCTCCTATTTGCACTTCTTGGTCCCCATCCCCAGATAATTTGACTATCAATTTGGGGGCAGTTGGGCACAATTTCATAGTTGTGTCAACCTCTAACCCATGCTTCTTGTCTATTCTTGGGGTAAGGTTGCTATCGGCTTACTGTTATGAAATTTATGAGATGCATCATTTGGGATTGCAGAATGAATTGTCCTGCATTTCCATCCCTAGTTATAAAACTGCGCAATTGCAACAAAATTCATTCACTCCAGAAAATAGTAGCGGCATATCTTCGTTTTTTAGCAGAATGGACATCAATAGAACCTTTGTTATTGGCACACATATGCCTTCTGTGGAAATTTGGTCTTTTGATCCTAATGAAGTTAAAGTAGTTGCTTGTGGGGCAATTTCAATAACGAATACAATGGGGACTACCAAAAGTGGTTGTGTACCTGAAGATGTGCGGCTTGTATTTGTTGATAAGTATTATGTTCTTGCTGGATTGAGGAATGGAATGCTCCTTCGCTTTGAGTGGCCAACAGAATCATCTTCTTCATTATCAATACCATTGAATGTGGCCAATACGGCTTCATGTTCTATAGATTTGGTAAATTCTGTAACGAATGCCTTTGACAAAAGAAATGACCTTCCTTCCATGCTTCAATTGATTGCCATTCGTCGCATTGGCATTACTCCTGTTTTCTTGGTGCCCCTAGATGACACACTTGATACTGATATTATCATTCTGTGTGAGAGACCTTGGTTGTTGCATAGTGCAAGACACAGCCTTTCCTATACTTCTATTTCATTTCAGCCATCCACACACGTTACTCCTGTTTGCTCTATTGAGTGTCCAAAAGGAATATTGTTTGTTGCAGAAAACAGTTTACATCTGGTGGAGATGGTGCACAGCAAAAGACTTAATGCGCAGAAGTTTCATTTAGAGGGCACTCCACGGAAGGTCCTGTATCACACTGAAAGCAGGATGTTGCTTGTGATGAGGACTGAACTGAATTGTGGTACATACGTGTCTGATATATGCTTTGTGGATCCCCTAAGTGGATCGGTACTGTCATCTTTTAGACTTGACCCTGGGGAAATGGGAAAATCCATGGAATTAGTAATGGCTGGAAATCAGCAGGTTCTTGTAGTTGGAACTAGTTTGTCTTCCGGTCTGGCCATAATGCCCAGTGGTGAAGCAGAGAATGCCAAGGGTCGCCTTCTTGTTCTATACCTTGATCATGTGCAAAATTCTGATAGTGGGTCAATGACATTATGTTCAAAGGCAGGGTCATCATCTCAACGTACTTCACCATTTCATGAAAATGTTTCATATGCTCCTGAACAGCTATCAAGCAGTAGCCTTGGCAGCAGCCCTGATGATGATAGTTCTGATGGCATCAAACTTGATGAAAATGAAGTATGGCAGTTCCGATTGGCTCATGCATACACATGGCCAGGAATGGTGCTTGCAATCTGTCCTTATCTCGATCGTTACTTCTTGGCATCTGCTGGCAATGCTTTCTATGTTTGTGGATTCGCAAGTGACTATCCCCAAAGAATGAGAAGGCTTGCAGTGGGAAGGACACGCTTCATGGTAACATCCTTGACTGCACATTTTACTAGAATTGCAGTTGGTGATTGCCGTGATGGGATCCTTTTCTATTCTTACCATGAGGATACAAAAAAACTGGAGCAACTTTACTCTGACCCATCACTGAGGTTAGTTGCTGATTGCATTCTTATGGATGCTGAGACAGCAGTTGTTTCAGATCGCAAAGGAAGCATTGCCGTCTTATGTTCAGATCATTTGGAAGACAATGCAAGTCCAGAATGCAACTTGTCACTAAGCTGTGCGTATTTCATGGCTGAGGTAGCCATGAGCATCCGGAAGGGTTCATATTCTTACAGACTTCCAGCTGAGGATGCTTTGCAAGGTGGCAATGGCCCCAAGACAATTGTTGACTCACTACAAAATACAATTATTGCTAGTACTCTGTTAGGAAGCATCATGATCTTCATCCCTTTGTCAAGGGAAGAATATGAGCTCCTAGAAGCTGTGCAAGCAAGGCTTGTTGTACATCATTTGACTGCGCCTGTTCTCGGAAACGATCATAATGAGTTTCGTTGCCGTGAAAATCCAGCTGGAGCACCCAACATACTCGATGGCGACATGTTGACTCAGTTTCTGGAGTTGACAAGTATGCAGCAACAAATCATTTTGTCATCCGAGCCGCCAGAAATGGTAAAACCAAATTTGAAGCCGCTTCTACCTCCACATGTTCCTGTCAATCAGGTGGTTCAACTTCTTGAAAGAGTTCATTATGCGTTGAACTGA 4107 0.4239 MAVSEEECSKPGPSSCPSSTKPYYLSKCVLRASVLLHVLHGHIRSPSSNDVVFGKETSIELVVIDEDGMVQSICDQPVFGTIKDLAILRWNAQFHQRDPQMHGKDLVVALSDSGKLSFLTFCNEMHRFFPVTHFQLSNPGNTRDLPGRMLAVDSSGCFIAVSGYEDRLALFSVSVAGNDIIDERIIYPCESGGTASTSTSSHRTNIRGTIWSICFVSQDCRQPSKEHNPVLAVVLNRRGALLNELMLLEWNITARTISVISQYVEAGPLAYNIVEVPNSHGLAFLFRAGDALLMDLSDALKPCCLCRTSLNILPNAMEEQTFVEDSCKLQDVDDERFNVAACALLELSDYDPMCIDSDNAGTNSGYKFVCSWSWEPVNNEDHRMIFSLNTGEIFMIEILDSNDGLKVNLSECLYKGLPCKALLWVESGYLAAIIEMGDGMVLKLEDGRLCYTNPIQNIAPILDMAVVDYHEEKHDQVFACCGVAPEGSLRIIRSGISVEKLTRTAPIYQGVFGAWTVRMKVTDLYHSFLVLSFVEQTRILSVGLSFTDVTDSVGFQPNVCTLACGLLGDGLLVQIHRSTVRLCLPTQAAHSEGICLSSPICTSWSPSPDNLTINLGAVGHNFIVVSTSNPCFLSILGVRLLSAYCYEIYEMHHLGLQNELSCISIPSYKTAQLQQNSFTPENSSGISSFFSRMDINRTFVIGTHMPSVEIWSFDPNEVKVVACGAISITNTMGTTKSGCVPEDVRLVFVDKYYVLAGLRNGMLLRFEWPTESSSSLSIPLNVANTASCSIDLVNSVTNAFDKRNDLPSMLQLIAIRRIGITPVFLVPLDDTLDTDIIILCERPWLLHSARHSLSYTSISFQPSTHVTPVCSIECPKGILFVAENSLHLVEMVHSKRLNAQKFHLEGTPRKVLYHTESRMLLVMRTELNCGTYVSDICFVDPLSGSVLSSFRLDPGEMGKSMELVMAGNQQVLVVGTSLSSGLAIMPSGEAENAKGRLLVLYLDHVQNSDSGSMTLCSKAGSSSQRTSPFHENVSYAPEQLSSSSLGSSPDDDSSDGIKLDENEVWQFRLAHAYTWPGMVLAICPYLDRYFLASAGNAFYVCGFASDYPQRMRRLAVGRTRFMVTSLTAHFTRIAVGDCRDGILFYSYHEDTKKLEQLYSDPSLRLVADCILMDAETAVVSDRKGSIAVLCSDHLEDNASPECNLSLSCAYFMAEVAMSIRKGSYSYRLPAEDALQGGNGPKTIVDSLQNTIIASTLLGSIMIFIPLSREEYELLEAVQARLVVHHLTAPVLGNDHNEFRCRENPAGAPNILDGDMLTQFLELTSMQQQIILSSEPPEMVKPNLKPLLPPHVPVNQVVQLLERVHYALN* 1369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3015 1368 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 18 1365 - -
Dod01g3015 1368 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 105 665 IPR018846 -
Dod01g3015 1368 Pfam CPSF A subunit region 935 1321 IPR004871 GO:0003676|GO:0005634
Dod01g3015 1368 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR (CPSF) A SUBUNIT PROTEIN 18 1365 - -
Dod01g3015 1368 Gene3D - 496 896 IPR015943 GO:0005515
Dod01g3015 1368 MobiDBLite consensus disorder prediction 1 20 - -
Dod01g3015 1368 Gene3D - 1066 1233 IPR015943 GO:0005515
Dod01g3015 1368 Gene3D - 35 457 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3015 Dod-Chr1 70858579 70868502 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3015 K12830 - gmx:100806799 2142.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3015 01 70858579 70868502 Dod01g3015 01 70858579 70868502 ECH