Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2998 ATGTCAAATCCGTTGTCGTGGTTGTCTCGCTTACGCTCTTCCTCCAACTACTTGTACCGCACTCTCCATTACAACATCAGAAGAACTCACACAAACACAAACGCTTCCGCCACCAATGATGTCTTTAACTCCCACAGTAACAGAACAAGGATGACGTGGACAGGTTCCGTGCTTCCTCTTGCTGTCGCTGTTTCTGCTGCTGCTGCTGCTGCTGGTTCTCTTGCCCTTCATCCCCATTCCAATCCTTCCTTCTGTGATTCCCATAACAGAGATGCTAGCTTTGGGGGCAAGGGTAGCACCCAGTATGTTGTTAAGGGATCGCAGAAGGAATTTCCACAGGAGCTTCTCAACAAGTTGAAAGCCATCTGTCAGGATAACATAACACTTGATTATGAGGAGAGGTATAACCATGGAAAACCACAAAACAGCTTTCACAAGGCTGTCAATATCCCAGATGTTATTGTTTATCCAAGATCTGAAGAGGAGGTCTCCAAGATTGTCAAATCATGTAACAGTCATAAGGTTCCCATTGTACCTTATGGTGGAGCTACATCACTTGAGGGTCATACGTTATCTCCTAATGGAGGGGTTAGCATTGACATGTCATTAATGAAAAGAGTAAAGGCATTACATGTTGATGACATGGATGTGGTTGTTGAGCCTGGAATTGGATGGATGGAGCTTAATGAGTATTTGGAACCTTATGGTCTATTTTTTCCACTTGATCCAGGTCCTGGTGCAAGCATTGGAGGCATGTGTGCTATGCGCTGCTCTGGTTCTTTAGCCGTGAGACTGCATTTACGTGATGATGTATTTATTGTACTGATTGTGTTCCGGGTGGTTCTTGCCAATGGAGATATGGTGAAGACCGCATCTCGTGCTAGAAAGAGTGCTGCAGGGTATGATCTGACCCGTTTGATGATTGGAAGTGAAGGAACACTTGGTGTTATAACAGAAGTAACACTGCGACTTCAGAAACTTCCCCAGTATTCAGTGGTTGCAATGTGCAATTTTCCTTCCATTAAGGATGCAGCAGATGTTGCTATTGCGACTATGATGTCTGGTACACAGGTAGGACTCTGGCTTCAAATTTTGATATATTCTCCTTCCAATTATGGCAATTCTTTTTATGCTGGTCAGGTGTCGAGGGTTGAGCTACTGGATGAAGTTCAAGTGAGAGCTATCAATGTCGCTAATGGGAAGAATTTCCCCGAGTGCCCAACTTTAATGTTTGAATTTATAGGAACAGGAGCCATAGCAAATGCTGATGTGCACAAAGAAGAAGACCCACTGATGCACAATTGCACATAG 1311 0.4416 MSNPLSWLSRLRSSSNYLYRTLHYNIRRTHTNTNASATNDVFNSHSNRTRMTWTGSVLPLAVAVSAAAAAAGSLALHPHSNPSFCDSHNRDASFGGKGSTQYVVKGSQKEFPQELLNKLKAICQDNITLDYEERYNHGKPQNSFHKAVNIPDVIVYPRSEEEVSKIVKSCNSHKVPIVPYGGATSLEGHTLSPNGGVSIDMSLMKRVKALHVDDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGASIGGMCAMRCSGSLAVRLHLRDDVFIVLIVFRVVLANGDMVKTASRARKSAAGYDLTRLMIGSEGTLGVITEVTLRLQKLPQYSVVAMCNFPSIKDAADVAIATMMSGTQVGLWLQILIYSPSNYGNSFYAGQVSRVELLDEVQVRAINVANGKNFPECPTLMFEFIGTGAIANADVHKEEDPLMHNCT* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2998 436 PANTHER D-LACTATE DEHYDROGENASE, MITOCHONDRIAL-RELATED 46 358 - -
Dod01g2998 436 PANTHER D-LACTATE DEHYDROGENASE, MITOCHONDRIAL-RELATED 380 422 - -
Dod01g2998 436 Pfam FAD binding domain 151 290 IPR006094 GO:0050660
Dod01g2998 436 PANTHER D-LACTATE DEHYDROGENASE 380 422 - -
Dod01g2998 436 Gene3D - 110 347 IPR016169 -
Dod01g2998 436 ProSiteProfiles PCMH-type FAD-binding domain profile. 147 327 IPR016166 GO:0071949
Dod01g2998 436 PANTHER D-LACTATE DEHYDROGENASE 46 358 - -
Dod01g2998 436 SUPERFAMILY FAD-binding/transporter-associated domain-like 111 328 IPR036318 GO:0050660
Dod01g2998 436 SUPERFAMILY FAD-linked oxidases, C-terminal domain 301 387 IPR016164 GO:0003824|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2998 Dod-Chr1 70661791 70668299 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2998 K00102 - gmx:100803612 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2998 01 70661791 70668299 Dod01g2998 01 70661791 70668299 ECH