Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2994 ATGGATTTGGAACCTACCGGTTATGAATCGGAAAAATGCTGCAATTGCGGCTGCGATTGCTCCACGGCAGCTCAGTCTTGCCGGAATGGGATCCGTACTGTGGAACACAAGCATGATGAATGGGAACACGGACATGACAACCAATCATTTGATTCGGTTGCTAGGGTTGAAATTGGGGATGAATACGCCGCGCTGCGCGAGGCAGTTAGCAGTCAGCAGCAAGCTATAAAAGATTTGTGTGATGAATTGGAGGAGGAGAGGAACGCCGCCTCCACGGCCGCCAACGAGGCAATGTCCATGATTTTGAGGCTGCAGAGGGAGAAGGCAGAGATTCAAATGGAAGCGAGGCAGTTCAAGCGTTTCGCGGAGGAGAGGTCATCTCATGATCAGCAGGAGCTGTTGGCGTTGGAGGATTTGTTGTATGAGAGGGAACAGGCAATTCATTCGCTTACTTGCGAAATTCAGGCTTATAGGCATCGGTTGATGAGTTTCGGCTTCACTGAGTCTGAGGTTGAGGGTGATGAATATGAGATTCCACCCTATAAGTGCCCTTCTTTGAGATGTAATGTGATGCATTCTGCTGCGGATGCTGACAATGACGATGATGGTGATGCAGATGTTGAGAAATATGTGTTTGGGGAAACTCCTAGGGACCGTTTGAGGAACTTGGAAAATAGGATCTCTCAAATGGAGATGGAGAGGACTCCCACCTACAGCCAGATGGATGGGGATTTTGATGGGAAATATTTTATGGAGAAGGTGGTGGTTGGACAGTCTCCGAGACGGACCAAACATTCAAGGAAATTTTCTTCTTGTGACTCGGCTTCGTTGGGCCCTGAGCTTCTGATGGATTCTCCCAGGCTGAACCGTAGCTTTAGGAAGGTAGATGAGGAGCATCCCAATTTGAAGAAGGTAGACAATGCAGCACCAGAAGCTGGTGATGATGATATGAGTGACAGAGTGTATACAATTGACTCTGTTTATAATGGTTTCACAGAGTTCAAAGCTGGAGGCGGCGGTGCTTACAATGATTATGCAACCACTCCAATGGACTTATTAGGGAATCAAGATGATTTTGAAGATCCCTATGTAAAGAAGCTTTACATGAGGCTTCAGGCACTCGAGGCTGATAGGGAATCGATGAAGCAGGCGATCATTTCAATGGCCACCGATAAAGCGCAACTTGTGTTACTGAAGGAAATAGCTCAACAGTTGTGCAGAGATATGTCACCACAAAGAAAAGGGATGGCGAGAAAGCCATTTAGCATGCCATTTGTCACAGTTTTTAAGTGGATCACGTCAATTGTTTTATGGAGAAACAAAGCTCATCAAATCAAGTATATGTTCGGGCTACCAACTGAGAGTGTTGGCTTGCTAATGCTCCTGGACAAGGGACCCCGTGTACAGTCGTGGAGATATTTTTCGAGTACACAATTGGGAGATTATTAG 1449 0.4651 MDLEPTGYESEKCCNCGCDCSTAAQSCRNGIRTVEHKHDEWEHGHDNQSFDSVARVEIGDEYAALREAVSSQQQAIKDLCDELEEERNAASTAANEAMSMILRLQREKAEIQMEARQFKRFAEERSSHDQQELLALEDLLYEREQAIHSLTCEIQAYRHRLMSFGFTESEVEGDEYEIPPYKCPSLRCNVMHSAADADNDDDGDADVEKYVFGETPRDRLRNLENRISQMEMERTPTYSQMDGDFDGKYFMEKVVVGQSPRRTKHSRKFSSCDSASLGPELLMDSPRLNRSFRKVDEEHPNLKKVDNAAPEAGDDDMSDRVYTIDSVYNGFTEFKAGGGGAYNDYATTPMDLLGNQDDFEDPYVKKLYMRLQALEADRESMKQAIISMATDKAQLVLLKEIAQQLCRDMSPQRKGMARKPFSMPFVTVFKWITSIVLWRNKAHQIKYMFGLPTESVGLLMLLDKGPRVQSWRYFSSTQLGDY* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2994 482 Pfam Zein-binding 64 154 IPR007656 -
Dod01g2994 482 MobiDBLite consensus disorder prediction 294 316 - -
Dod01g2994 482 ProSiteProfiles GTD-binding domain profile. 60 158 IPR007656 -
Dod01g2994 482 Coils Coil 62 124 - -
Dod01g2994 482 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 1 456 - -
Dod01g2994 482 Coils Coil 364 384 - -
Dod01g2994 482 PANTHER BNAANNG28530D PROTEIN 1 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2994 Dod-Chr1 70595910 70598965 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2994 - - gmx:100797605 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2994 01 70595910 70598965 Dod01g2994 01 70595910 70598965 ECH
Dod01g2994 01 70595910 70598965 Dod07g0352 07 4260655 4264701 PCT