Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2984 ATGGATCCCTCCATCTATGGTGGCTGCACCACCAAACCCTTCCTCATTACCCTCCTCCTCCTCCTCTTCCTCCTCCCCCTCCACTCCCATTCTGCATCATCTTCAACTTCTTCAACCTCAACCTCAACCTCCTCTGGTCAAATCAACTCCAACTCCATCCTCGTAGCTCTCCTTGACTCCCACTACACAGAACTCGCCGAGCTCGTAGAGAAAGCCCTCCTCCTCCAGAAGCTCGAGGACGCCGTCGGCAACCACAACATCACCATCTTCGCACCACGCAACCAAGCACTGGAACGCGACCTCGACCCTGAGTTCAAGCGCTTCCTCCTCGAACCCCGCAACCTCCGCGCCCTCCAAACCCTTCTCATGTCCCACATTATCCCCACTCGCATCTCCTCCTCCTCCTGGCCCTCCGCCAACCTCTCCCCACTCCGCCACCAAACCCTCTCCTCCGACCACCACCTCCACTTAACAACCAACTCCTCCGGCCACAAAACCGTCGAATCCGCCGCTATCCTCCGCGCCGACGACGTCCTCCGCCCCGACGGCGTCATCCACGGCATCGAGCGCCTCATCGTCCCGAGATCCGTCCAGGAGGATTTCAACAACCGCCGCAGCCTCCGCTCCATCGCGGCGGTGCTTCCGGAGGGAGCACCAGAGGTCGATCCGCGAACACACCGTCTCAAGAAGCCCGCTCCGGTCCCCGCCGGAGCTCCACCGGTGCTCCCGATCTACGACGCCATGGCGCCGGGACCGGCAATATCTCCGGCGCCGGCACCAGGTCCCGGAGGCCCCCACGGCCACTTCAACGGCGAGCGCCAGGTCCGTGACTTCATCCAGACGCTCCTGCATTACGGCGGTTACAACGAGATGGCTGACATTTTGGTGAATCTGACATCGCTCGCGACGGAGATGGGGCGGTTGGTGTCCGAGGGTTACGTCCTAACGGTTTTGGCGCCGAACGACGAAGCGATGGCGAAGCTTACGACGGATCAATTGAGTGAGCCGGGTGCACCGGAGCAGATTATTTACTACCATATCATACCGGAGTATCAGACGGAGGAGAGTATGTACAATGCAGTTAGAAGGTTCGGGAAGATTCGGTATGATACACTGAGGTTGCCGCATAAGGTGGTTGCTCAGGAGGCTGATGGGTCTGTGAAGTTTGGGCATGGTGATGGGTCTGCGTATCTCTTTGATCCTGATATTTATACCGATGGTAGGATCTCTGTTCAAGGGATTGATGGGGTTCTTTTCCCGTTGGAGGAGGAAGAGGAGGAGAATAAGGCTCAACGCAGAACCACCCCGCTTGTTAAAGTTGCTGCTAAGCCCCGGAGAGGGAAATTGCTGGAAGTCGCCTGTAGCATGCTTGGAGCTTTTGGCCAAGTCTGCTAA 1395 0.5814 MDPSIYGGCTTKPFLITLLLLLFLLPLHSHSASSSTSSTSTSTSSGQINSNSILVALLDSHYTELAELVEKALLLQKLEDAVGNHNITIFAPRNQALERDLDPEFKRFLLEPRNLRALQTLLMSHIIPTRISSSSWPSANLSPLRHQTLSSDHHLHLTTNSSGHKTVESAAILRADDVLRPDGVIHGIERLIVPRSVQEDFNNRRSLRSIAAVLPEGAPEVDPRTHRLKKPAPVPAGAPPVLPIYDAMAPGPAISPAPAPGPGGPHGHFNGERQVRDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEESMYNAVRRFGKIRYDTLRLPHKVVAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPLEEEEEENKAQRRTTPLVKVAAKPRRGKLLEVACSMLGAFGQVC* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2984 464 SMART fasc_3 88 195 IPR000782 -
Dod01g2984 464 SMART fasc_3 316 421 IPR000782 -
Dod01g2984 464 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 4 462 IPR044654 -
Dod01g2984 464 Gene3D FAS1 domain 53 194 IPR036378 -
Dod01g2984 464 ProSiteProfiles FAS1/BIgH3 domain profile. 275 403 IPR000782 -
Dod01g2984 464 SUPERFAMILY FAS1 domain 51 195 IPR036378 -
Dod01g2984 464 Gene3D FAS1 domain 271 420 IPR036378 -
Dod01g2984 464 SUPERFAMILY FAS1 domain 255 421 IPR036378 -
Dod01g2984 464 Pfam Fasciclin domain 61 194 IPR000782 -
Dod01g2984 464 Pfam Fasciclin domain 310 419 IPR000782 -
Dod01g2984 464 ProSiteProfiles FAS1/BIgH3 domain profile. 49 192 IPR000782 -
Dod01g2984 464 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 17 4 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2984 Dod-Chr1 70479754 70483350 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2984 - - gmx:100800956 673.7