Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2969 ATGGATCCAGCGAGCACGCCACTGGGGCAAATGCTATTGGAGGAGATCACTCCCGTTGTGATGGTTCTCTCCACTCCTTCCGTCGAGGACTCTTGCCTCAAGAACGGCCTCTCTTTCCTCCAGATCCTTACTCCTTTCTGCTCCTTCAACAACATCGACGTGCCTGTTAGAACCGCCAGTGACCAGCCCTATCGCCTTCACAAGTTCAAATTGCGACTGTTCTATGCCTCCGATGTTAAGAAGCCCGATTTGAAGGTAGCTAAAGAGCATTTGAAGCAAGTTATTACGGAGGCAGGGGAGAGAGTGTTTTCTGAGTTGAGTACGGATGTACCAGAAATTGATCATGAACTTTCTAGTTCTGAATACAATACACCATCCTGGTTTCAGCTGCTCAATAAAGAGCTTGTCCGGGTGGCTTCCTTTTCGGACCATGAAGCTTTTGACCATCCTGTGGCATGTCTTCTAGCTGTTTCTTCAAATGATGAACAGCCTATTAACAGATTTGTTGACCTTTTTAATACCAACAAGCATCCTTCTGTTCTTAATGATGGTGCAATGGATCCAAAGATTTTGAAGCATTACTTGTTAGTGCACGATAATCAAGATGGGCCTGTAGACAGAGCAAGTAAAATATTAACAGAAATGAGGAGTACATTTGGTACAAGTGAGTGTTTGTTGCTTTGCATTAATTCTGCACCCGATGCTCCAATCAAACATCAAGAGAATCCTTGGGCTTCATATATATCTGATGCTTCACCTAGTCTTGATCTTGGTTGCTTTCTTAACATTGATGATATCAATAAGATCAAGGATCTAATGCAAGACTTAGCATCTAAGCACATCATTCCAAATATGGAGCAAAAAATTCGTGTGCTCAATCAACAGGTTTCTGCAACCCGAAAAGGTTTTAAAAACCAAATAAAAAATTTATGGTGGAGAAAGGGCAAAGAAGATAGTGCAGATTCTCCCAATGGTCCGATGTATAATTTTAACTCCATTGAATCCCAGATTCGAGTTTTGGGTGATTTTGCTTTCATGTTACGTGATTATGAACTTGCTTTGTCAAATTATCGCCTGATTTCCACAGATTACAAGATTGATAAAGCCTGGAAACGATATGCTGGTGTGCAGGAAATGATGGGACTTACGTACTTCATGTTGGATCAATCTCGAAAGGAAGCTGAATATTGCATGGAAAATGCTTTTAACACATATTTAAAACTTGGATCATTGGGTCAGCAAAATGCAACACGATGTGGTCTATGGTGGATAGAAATGTTGAAAGTACGAGATCAGTATAAGGAGGCAGCTACTGTTTATTTTCGTATTTGTGGTGAGGATATCCTACACTCTGCTGTGATGCTTGAACAAGCATCGTACTGCTATATGTTGTCTAAACCCTCCATGTTACGCAAATATGGATTTCATCTGGTGCTTTCTGGTGAGCAGTATAAAAAGTGTGATCAGCTCAAACATGCAATTCGAACGTACAGAAGTGCTCTTTCTGTTTTTAAAGGAACTTCTTGGAGTTATATCAATGGCCATGTTCATTTTCATATCGGACAGTGGTATGCTTCTATTGGGATGTATGATGTGGCTGTCAAGCATATGATGGAGATCTTGGCCTGCAGTCACCAGTCCAAGGCAACACAGGAATTATTCCTGGGCGATTTTCTTCAAATTGTGGAGAAAACAGGGCGGACATTTGAGGTAACCAAACTTCAATTGCCTTTGATAAACATTTCTTCAATCAAGGTCTTCTTCGAAGATTACCGAACTTTTGGATCACCTTCAGCTGCTAACACTAGAGAAGGCTTGTGGCATTCTTTGGAGGAAGAAATGATACCTTCATTCTCTGTTGCCAAGACTAACTGGTTGGAGTTGCAATCGAAGCTTATTCCAAAAACGCACAGTCAATCAAATATTTGTGTTGCTGGAGAAGCTGTGAAGGTGAATATTGAATTCAGAAACCCTCTACAAATCCCAATTCCTATATCTGGTGTTGCACTTGTATGCAAGCATTTGGCTAGTAGTGATGGAAGTAAATCAGATGAAAACCGGTCAAGCGCAGCGAATGATAACGAGGTTGATCACTTCAGGGATATGAGCTTAGACAATTCCTCATTTTTGGCGTCTGAGGTTGATTTCTTACTAGGAGGTGGTGAGACAACCATGGTTCAACTATCAGTTACCCCCAGGGCAGAAGGTACTCTTGCAATTCTCGGTGTTCGGTGGAAACTGTCAGGTACTATAGTTGGCTTTCACAACTTTGAGTCGAGTCACCCAAAGATTAATGTAAAAGGAAGAAGGAAAGCAAAGCGCTCACCTGAAGACATGTTTAAATTTATGGTGATTAAGAGCATACCCAAACTAGAGGGTTCCATTCACCATTTACCTGGAGAAGCATATGCTGGAGATTTACGGCAACTTGTACTACAGTTGAGGAATCCATCAGAGTTTCCTGTTAAGAATCTGAAAATGAAGATTAGTCATCCTAGATTCTTGATTATTGGGAATCAGGAACATATAAAGTCGGAGTTTCCTGCTTGCCTAACAAAGAAGACAGATTCAGCACAAAGTGATGCACAAGCTAATCCTAGTCTTATGTCTAATACAGTCTTTCTGTTTCCAGAGGGCACTTCAATTCAAGGTGAAGAACCCTTCTTGTGGCCTCTTTGGTTTAGGGCTGCTGTTCCAGGAGACATTTCTCTTTATATGAGTATATATTATGAGACGGGAGAAACATCAAGTGTCATCAGATATCGCACTCTTCGCCTGCATTACAATGTGCAGGTATTACCATCATTGGATGTTTCATTTCAAATCAGTCCTTCTCGAATGAGATTGCAAGAATTCCTTGTTCAATTGGATGTTATTAACAAGACAAGCTCAGAAAGTTTTCAAGTTTACCAGTTGTCATCTATTGGGAGCCACTGGGAAATCTCATTACTTCAACCTCCTGATACTATTTTCCCTTCGCAATCATTGATGGCTGGTCAAGCAATATCATGTTTCTTCACACTAAAGAACTCAAGGAGATTATTAACGTCTGAGGACAAGGTATCTGCCATGCCTGTCAGAAGTGATGTAAGCTTGGTTCCCCAAAGCAGTGACGATTTAGTTTACAATATCAATAGTGCACCTTTGGTCAATTTCCACCATTATGAAAGATTGCAGCAGGAAGTGTCACAAGAGGATCAGGGTGACTTAAATACTGTTGACTTTATATTGATCTCTCGACCACTGAAGAGCAACAACAATCCTGGTCTTTCTGCTCCTCCTCATGTTATGTCTCATCATGCGTGTCACTTCAGTACTGCTAGCACGGGCCCTATTTCATGGCTAGTGGATGGACCTCGAACCTTGCATCATGATTTTTCTGCATCCTTCTGTGAACTAAATCTGAAGATGCATCTTTTCAATTCGTCTGGCACCACTGCTTTTGTGCGCATTGACACCTTAGATTCTGCTGGTAATGGGGGACATAACAGTGTAAATATGGTTCAATCAGCAACTCCTGATAACCAAGCAGGGTGGCATGATGTCACACCGGTGAATGAACTCAAAGTCACATCAAATGTTCTCGAAACCCAACCTAGAAAGGCACTATCCTTGGAAAGTGTCTCCCCATACATTTGGTCTGGATCAAGCTCTACCAGTCTCCACCTTGAGCCTCTGTCGACAGCGGAAATTCCTCTTCAGATCTGCCTGTTCTCTCCTGGTACATATGACTTGTCAAATTATGTTTTGAATTGGAAACTTCCATCCGAAGGTCAGGGAGATGGGGATGAAACTAGACAGCGTTCCGGCAAGTGCCAGGGGTATAAATACTATCTCACTGTGCTCCAATCCACTTGA 3858 0.4165 MDPASTPLGQMLLEEITPVVMVLSTPSVEDSCLKNGLSFLQILTPFCSFNNIDVPVRTASDQPYRLHKFKLRLFYASDVKKPDLKVAKEHLKQVITEAGERVFSELSTDVPEIDHELSSSEYNTPSWFQLLNKELVRVASFSDHEAFDHPVACLLAVSSNDEQPINRFVDLFNTNKHPSVLNDGAMDPKILKHYLLVHDNQDGPVDRASKILTEMRSTFGTSECLLLCINSAPDAPIKHQENPWASYISDASPSLDLGCFLNIDDINKIKDLMQDLASKHIIPNMEQKIRVLNQQVSATRKGFKNQIKNLWWRKGKEDSADSPNGPMYNFNSIESQIRVLGDFAFMLRDYELALSNYRLISTDYKIDKAWKRYAGVQEMMGLTYFMLDQSRKEAEYCMENAFNTYLKLGSLGQQNATRCGLWWIEMLKVRDQYKEAATVYFRICGEDILHSAVMLEQASYCYMLSKPSMLRKYGFHLVLSGEQYKKCDQLKHAIRTYRSALSVFKGTSWSYINGHVHFHIGQWYASIGMYDVAVKHMMEILACSHQSKATQELFLGDFLQIVEKTGRTFEVTKLQLPLINISSIKVFFEDYRTFGSPSAANTREGLWHSLEEEMIPSFSVAKTNWLELQSKLIPKTHSQSNICVAGEAVKVNIEFRNPLQIPIPISGVALVCKHLASSDGSKSDENRSSAANDNEVDHFRDMSLDNSSFLASEVDFLLGGGETTMVQLSVTPRAEGTLAILGVRWKLSGTIVGFHNFESSHPKINVKGRRKAKRSPEDMFKFMVIKSIPKLEGSIHHLPGEAYAGDLRQLVLQLRNPSEFPVKNLKMKISHPRFLIIGNQEHIKSEFPACLTKKTDSAQSDAQANPSLMSNTVFLFPEGTSIQGEEPFLWPLWFRAAVPGDISLYMSIYYETGETSSVIRYRTLRLHYNVQVLPSLDVSFQISPSRMRLQEFLVQLDVINKTSSESFQVYQLSSIGSHWEISLLQPPDTIFPSQSLMAGQAISCFFTLKNSRRLLTSEDKVSAMPVRSDVSLVPQSSDDLVYNINSAPLVNFHHYERLQQEVSQEDQGDLNTVDFILISRPLKSNNNPGLSAPPHVMSHHACHFSTASTGPISWLVDGPRTLHHDFSASFCELNLKMHLFNSSGTTAFVRIDTLDSAGNGGHNSVNMVQSATPDNQAGWHDVTPVNELKVTSNVLETQPRKALSLESVSPYIWSGSSSTSLHLEPLSTAEIPLQICLFSPGTYDLSNYVLNWKLPSEGQGDGDETRQRSGKCQGYKYYLTVLQST* 1286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2969 1285 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 634 827 IPR013935 -
Dod01g2969 1285 Gene3D Tetratricopeptide repeat domain 327 553 IPR011990 GO:0005515
Dod01g2969 1285 PANTHER TRANSPORT PROTEIN TRAPP 8 1284 IPR024420 -
Dod01g2969 1285 SUPERFAMILY TPR-like 430 549 IPR011990 GO:0005515
Dod01g2969 1285 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 164 517 IPR024420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2969 Dod-Chr1 70310197 70325836 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2969 K20305 - gmx:100809666 2237.61