Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2934 ATGGAAGAGGCTAAATCCAGGTTCAAGCGGATTTGCGTCTTCTGTGGCAGCAGTTCTGGGAAGAAAGCTACCTACCAAGAAGCTGCTGTAGAACTTGGAAAGGAGCTGGTGGAGAGAAGGATTGATTTGGTCTATGGAGGTGGTAGCGTGGGGTTGATGGGTCTCGTTTCTCAGGCAGTTCATGATGGTGGGCGCCATGTTCTAGGGTTTGTTCTCTCACTCCATTCTTTGTTGTGCATAACAGGCGATCCAATTGGGGAAGTGCGAGCCGTCTCTAACATGCACCAAAGGAAAGCCGAGATGGCTCGTCAAGCTGATGCCTTCATTGCTCTCCCTGGAGGATATGGAACCCTTGAAGAGTTGCTTGAAGTCATTACATGGGCTCAGCTTGGGATCCACAGCAAACCCGTGGGCCTGTTGAATGTGGACGGATTTTACAATTCCTTGTTGTCTTTCATTGACAAGGCCGTTGATGAAGGCTTTATATCCCCTACGGCACGACGCATTATCGTGTCAGCTCCCACAGCCAAGCAATTGATGCTGGAGCTAGAGGAACATGTTCCTGTACCAGATGAGTTTGCGTCCAAGTTGGTGTGGGAGGACAGACTAAATTACGTGCCTGAATCAGAAGTTGCCATGTGA 642 0.4953 MEEAKSRFKRICVFCGSSSGKKATYQEAAVELGKELVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGFVLSLHSLLCITGDPIGEVRAVSNMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHSKPVGLLNVDGFYNSLLSFIDKAVDEGFISPTARRIIVSAPTAKQLMLELEEHVPVPDEFASKLVWEDRLNYVPESEVAM* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2934 213 Gene3D - 1 185 - -
Dod01g2934 213 TIGRFAM TIGR00730: TIGR00730 family protein 9 184 IPR005269 GO:0009691|GO:0016787
Dod01g2934 213 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG7 4 211 - -
Dod01g2934 213 PANTHER LOG FAMILY PROTEIN YJL055W 4 211 - -
Dod01g2934 213 Pfam Possible lysine decarboxylase 53 180 IPR031100 -
Dod01g2934 213 SUPERFAMILY MCP/YpsA-like 7 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2934 Dod-Chr1 69778498 69782492 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2934 K22522 - gmx:100792663 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2934 01 69778498 69782492 Dod07g0287 07 3562228 3567082 PCT