Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2923 ATGACGCCTGCCTCTGCTGCTTCCACTGTCGTCGTACCCAGGAACTTCAGATTGCTGGAGGAACTTGAAAGGGGTGAAAAAGGGATTGGAGACGGCTCAGTTAGCTATGGAATGGATGATGGTGACGACATTTACATGCGCCATTGGACTGGCACTATAATTGGCCCCCCTAATACTGTACATGATGGAAGAATTTACCAATTGAAGCTGTTTTGCGATACAGACTACCCAGATAAATCCCCAAGTGTTCGGTTTCATTCACGGATCAATATGACTTGTGTTAATCATGAAACCGGAGTGGTTGAAGCAAAGAAATTTGGTCTCTTAGCAAATTGGCAACGAGGGTATACTATGGAGGATATACTGACCCAGCTGAGGAAGGAAATGGCATATCCATTTAACCGGAAGCTTGTCCAGCCTCCGGAAGGTACCTTCTTTTAG 441 0.4558 MTPASAASTVVVPRNFRLLEELERGEKGIGDGSVSYGMDDGDDIYMRHWTGTIIGPPNTVHDGRIYQLKLFCDTDYPDKSPSVRFHSRINMTCVNHETGVVEAKKFGLLANWQRGYTMEDILTQLRKEMAYPFNRKLVQPPEGTFF* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2923 146 Gene3D Ubiquitin Conjugating Enzyme 2 146 IPR016135 -
Dod01g2923 146 SMART ubc_7 16 144 - -
Dod01g2923 146 Pfam Ubiquitin-conjugating enzyme 43 135 IPR000608 -
Dod01g2923 146 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 13 146 IPR000608 -
Dod01g2923 146 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1D 10 140 - -
Dod01g2923 146 SUPERFAMILY UBC-like 10 146 IPR016135 -
Dod01g2923 146 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 10 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2923 Dod-Chr1 69679970 69683367 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2923 K10704 - cpap:110810615 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2923 01 69679970 69683367 Dod07g0277 07 3462200 3465640 PCT