Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2919 ATGGCTTCAATAACGAAAAGGCTAGAAGGTAAAGTGGCAATAATCACAGGAGGTGCAAGCGGTATTGGTGCAGCCACAGCCAAAGTATTCGTTCAACACGGCGCCAAAGTAATCATTGCAGATGTCCAAGACGAACTAGGCATGTCCCTGTGCAAAAGCCTTAGCCAAAATGCCACCAATACTAATAATATTCTCTACGTTCACTGCGATGTAACTTCTGAACCAGACATCAAAAACATGGTTGACATGGCAGTGTCCAAGCACGGCAAACTCGACATCATGTACAACAACGCTGGCATCGCCGGCGAGACCTCGAACCGATCATCAATACTGGTGGCTTCAAATAACGAAGATTTTAAAAGGGTTTTCGATGTCAATGTTTATGGAGCTTTCTTGGGCGCCAAGCATGCCGCTAGGGTCATGATCCCCGCGAAGAGAGGGGTCATTCTTTTCACATCAAGCATTGCTTCGGTGATTGGTGGCCAGGCAAACCATGCTTACACCGCGTCGAAGCACGCGGTTGTGGGGCTTATGAAGAACTTGTGTGTTGAACTGGGACAACATGGGGTCAGAGTTAACTGTATCTCTCCCGGAGGAATTCCCACTCCGTTGCTAAACAATGCGTTGAAGATGAACAGAAACGAGACGCAGAAGTTGCTGTGTTCAGCTTCGGTGTTGAAAGGGGGTGTTCTTGAGGCTGAGGACATAGCTGAAGCAGCGGTTTATTTGAGCAGTGATGAGGCTAAGTTCGTTAGTGGAGTGAACTTTGTGTTGGATGGGGGTTATAGCACAACCAATATGTCGTTCGCTTTGGCACTCAAAGGTATGGTGATGGACCAAACCACCACTAACGGCATACATTAA 864 0.4745 MASITKRLEGKVAIITGGASGIGAATAKVFVQHGAKVIIADVQDELGMSLCKSLSQNATNTNNILYVHCDVTSEPDIKNMVDMAVSKHGKLDIMYNNAGIAGETSNRSSILVASNNEDFKRVFDVNVYGAFLGAKHAARVMIPAKRGVILFTSSIASVIGGQANHAYTASKHAVVGLMKNLCVELGQHGVRVNCISPGGIPTPLLNNALKMNRNETQKLLCSASVLKGGVLEAEDIAEAAVYLSSDEAKFVSGVNFVLDGGYSTTNMSFALALKGMVMDQTTTNGIH* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2919 287 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 154 182 IPR020904 GO:0016491
Dod01g2919 287 PANTHER SECOISOLARICIRESINOL DEHYDROGENASE-RELATED 2 273 - -
Dod01g2919 287 PRINTS Glucose/ribitol dehydrogenase family signature 226 246 IPR002347 -
Dod01g2919 287 PRINTS Glucose/ribitol dehydrogenase family signature 89 100 IPR002347 -
Dod01g2919 287 PRINTS Glucose/ribitol dehydrogenase family signature 141 157 IPR002347 -
Dod01g2919 287 PRINTS Glucose/ribitol dehydrogenase family signature 167 186 IPR002347 -
Dod01g2919 287 PRINTS Glucose/ribitol dehydrogenase family signature 12 29 IPR002347 -
Dod01g2919 287 PRINTS Glucose/ribitol dehydrogenase family signature 188 205 IPR002347 -
Dod01g2919 287 Gene3D - 2 278 - -
Dod01g2919 287 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 IPR002347 -
Dod01g2919 287 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 IPR002347 -
Dod01g2919 287 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 IPR002347 -
Dod01g2919 287 Pfam Enoyl-(Acyl carrier protein) reductase 17 263 - -
Dod01g2919 287 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 264 IPR036291 -
Dod01g2919 287 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 2 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2919 Dod-Chr1 69628169 69629150 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2919 4 261 Acyl Lipid Metabolism Gene Families AT1G24360 28.571 3.80e-24 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2919 - - aprc:113863381 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2919 01 69628169 69629150 Dod01g2919 01 69628169 69629150 ECH