Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2913 ATGGATACAGGCCTCAAGTTCACAATTATATGGTTTTCTATATTTTCTCTGTTGTGCTTCACATGCACTTCTTCCCATATCAATACAAGATTTCCTTCTTCAACGGTCCGTCCAGCACTGGTTTTTGGTTCTGCCCAGAATGGGCTTTACAGAACAAAGTTCTTCACACAAATACTTGATCACTTCAATTACAATCCCCAGAGCTATCAAAGCTTCCAACAAAGATATCTCATCAATGATACCTATTGGGGGGGTGCAAACAAAAATGCTCCTATGTTTGTCTACATGGGTAATGAAGGAGACATAGAATGGTTTGCACAGAACACAGGTTTTATGTTCGAAGCAGCACCCTATTTCAAGGCCCTATTGGTTTTTATTGAGCATAGATACTACGGAGAATCATTTCCATTTGGGGGAAAAGAGGAGGCTGCAAATGCTAATAGCAACACACTTGGATACCTGAGTTCCACGCAGGCATTGGCTGATTATGCCACTCTCATCACCGATCTTAAGAAGAATTTGTCAGCGACTGACTCCCCTGTTGTGAGCGAGAGTGAGAATTGTTACAAAGTGCTTAAAGGGTCATGGAAACAAATAGAGGACACAGCCCAACAACCCAGAGGACTTGAACTACTGCGGAAATCTTTCAGAATATGCAAGAATTATATTAGCGTGGATGCTGTGACGGCTTGGCTTCGATCGGCTTTGATTTATGTGGCCATGACTGATTATCCAACACCTTCCAATTTCCTAACTCCCTTGCCAGCTTATCCAGTGAGAAAGATGTGCGAGGCGATTGATTACTCATCCACTGGAAACGAAACTTTCACCAGGTTATATGCAGCAGCTAATATATTCTACAACTACAGTGGGACTATGAAATGCTTTGATTTAAGTGATTTTGATGTGCTAGTTCAATATCTCGGGGGATGGGATTGGCAGGGCTGTACCGAGATGGTAATGCCCCTAGGTGGGAACAACGAGGAGAGCATATTTCCACCTCACAAGTGGAAGCTGCAAGACACAGTCTCTGACTGCACACGCACCTATCATATAACGCCAAGACCCCATTGGATTACCACTGAGTTTGGTGGCCAAGATATTGAGAGAGTTCTGAAAAGGTCTGGGAGCAACATTATCTTCTTTAATGGTTTAAGAGACCCTTGGAGCGGTGGGGGGGTGTTGAAAAATATATCAAGGACTATAGTTGCTATAGTAGCAAAAGAAGGAGCTCATCATGTAGACCTAAGGTTCTCAACTAAGGAAGATCCAGAGTGGCTAATAGACATAAGAAAACAAGAGTGCGATTGA 1311 0.4294 MDTGLKFTIIWFSIFSLLCFTCTSSHINTRFPSSTVRPALVFGSAQNGLYRTKFFTQILDHFNYNPQSYQSFQQRYLINDTYWGGANKNAPMFVYMGNEGDIEWFAQNTGFMFEAAPYFKALLVFIEHRYYGESFPFGGKEEAANANSNTLGYLSSTQALADYATLITDLKKNLSATDSPVVSESENCYKVLKGSWKQIEDTAQQPRGLELLRKSFRICKNYISVDAVTAWLRSALIYVAMTDYPTPSNFLTPLPAYPVRKMCEAIDYSSTGNETFTRLYAAANIFYNYSGTMKCFDLSDFDVLVQYLGGWDWQGCTEMVMPLGGNNEESIFPPHKWKLQDTVSDCTRTYHITPRPHWITTEFGGQDIERVLKRSGSNIIFFNGLRDPWSGGGVLKNISRTIVAIVAKEGAHHVDLRFSTKEDPEWLIDIRKQECD* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2913 436 Gene3D alpha/beta hydrolase 304 434 IPR029058 -
Dod01g2913 436 Gene3D Serine carboxypeptidase S28, SKS domain 183 336 IPR042269 -
Dod01g2913 436 Gene3D alpha/beta hydrolase 54 182 IPR029058 -
Dod01g2913 436 SUPERFAMILY alpha/beta-Hydrolases 110 416 IPR029058 -
Dod01g2913 436 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 4 182 - -
Dod01g2913 436 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 183 435 - -
Dod01g2913 436 Pfam Serine carboxypeptidase S28 184 432 IPR008758 GO:0006508|GO:0008236
Dod01g2913 436 Pfam Serine carboxypeptidase S28 57 181 IPR008758 GO:0006508|GO:0008236
Dod01g2913 436 PANTHER LYSOSOMAL PRO-X CARBOXYPEPTIDASE-LIKE PROTEIN 4 182 - -
Dod01g2913 436 PANTHER LYSOSOMAL PRO-X CARBOXYPEPTIDASE-LIKE PROTEIN 183 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2913 Dod-Chr1 69584120 69588513 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2913 K01285 - gmx:100787376 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2913 01 69584120 69588513 Dod01g2913 01 69584120 69588513 ECH