LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod01g2907	ATGGCTCAGTCATCGCAGAGTAAGAAACTGACGCCGAATCTGGATCAGCAGAGCACCAAGGTTCTGAACCTCACCGTCCTCCAGCGCATCGATCCTTTCATCGACGAGATTCTCTTCACCGCCGCTCACGTCTCTTTCTACGACTTCAACATCGATACTAATCAGTGGAGTCGTAAGGATGTCGAAGGATCTCTCTTCGTTGTCAAGAGGAATGCGCAGCCTCGGTTTCAGTTTATCGTAATGAATCGAAGAAATACAGATAACCTTGTGGAGAATCTATTGGATTTTGAGTATGAACTTAAAAAGCCATACTTATTATACCGGAATGCGGCACAAGAAGTTAATGGTATATGGTTTTACAATCCAGATGAATGTGAGGAAGTTGCAAATCTCTTTAATAGGATACTTAATGCATACCCAAAGGCACCGCCAAATACAATAATGCCTTCAAGCAAAAGTGAGTTTGAGGAACTTGAGCCGGTGTCAGTTATAACAGAAGGCCCTCTAGAGTCAGCTTCAGCTGCTGCTTCTGCAACTGATGCTTTTGATGATCGTGTATTTACAAACTTCTTCAGCACGTCTAAGGCCACTGGAAATTATGCTTCAAATGTAGAAAGTTTTAAACAGCTTTACCATTCTGCAACTGTCACTTCTACTGCTCCCAGTGGTTTGTTGTCTGCTGCACCTGCCATGCAAATACCACCTGCCTCTCTTTCAGCTTCATCTATATCAGGCTTCTCCCTTGATCCTCTTGAAACAGTCAACAGTGGCAATCAAGTCAATAATCTTGTCAAGCCTTCTACTTTCCTTGCATCCACTTCATCTTCACTATTAATTCCACCTATTTCTTCACCTGCGCCACCTAGTGCAGCTTTTCATAATTCCCTTAATCTGCCCCGCCAATATGGCACTCCAATGCTTCAACCCTTCCCACCACCTAATCCTCCTCCTTCTCTTGCCCCTATTTCTAGCTCTCCACAAAATAAACCTGTTATCAGCAGGGACAAAGTTCGTGATGCACTCTTATCACTGGTTCAGGATGATCAATTCATTGACATGATGTTCCAAACATTACTGAAGCTGAATCATTCATGA	1095	0.4329	MAQSSQSKKLTPNLDQQSTKVLNLTVLQRIDPFIDEILFTAAHVSFYDFNIDTNQWSRKDVEGSLFVVKRNAQPRFQFIVMNRRNTDNLVENLLDFEYELKKPYLLYRNAAQEVNGIWFYNPDECEEVANLFNRILNAYPKAPPNTIMPSSKSEFEELEPVSVITEGPLESASAAASATDAFDDRVFTNFFSTSKATGNYASNVESFKQLYHSATVTSTAPSGLLSAAPAMQIPPASLSASSISGFSLDPLETVNSGNQVNNLVKPSTFLASTSSSLLIPPISSPAPPSAAFHNSLNLPRQYGTPMLQPFPPPNPPPSLAPISSSPQNKPVISRDKVRDALLSLVQDDQFIDMMFQTLLKLNHS*	365

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod01g2907	364	Gene3D	-	10	138	IPR011993	-
	Dod01g2907	364	MobiDBLite	consensus disorder prediction	302	331	-	-
	Dod01g2907	364	Pfam	Dcp1-like decapping family	20	133	IPR010334	GO:0000290\|GO:0008047\|GO:0043085
	Dod01g2907	364	MobiDBLite	consensus disorder prediction	305	323	-	-
	Dod01g2907	364	PANTHER	TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1	5	361	IPR010334	GO:0000290\|GO:0008047\|GO:0043085
	Dod01g2907	364	CDD	EVH1-like_Dcp1	22	136	-	-
	Dod01g2907	364	PANTHER	DECAPPING ENZYME 1A, PUTATIVE-RELATED	5	361	-	-
	Dod01g2907	364	SUPERFAMILY	PH domain-like	22	141	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod01g2907	Dod-Chr1	69494731	69499420	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod01g2907	K12611		-	gmx:100786833	506.138