Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2903 ATGGATTCCATCGAAGTTGACTTCGGCACGCAGAGCCGCGGTGGTTCCCAGAAGGAACAAGGCATCCACACCTACGTGGCGCCATGGCCAATTTCCTCTGTAGCATGGTCAATGCGCCGCGACAAAGCCCCACGCCTCGCCATCGGTAGCTACTTAGAAGAGTACACCAACAAGGTCGAACTCGTCCACTTCAACTACGACACCTTCAATTTCACCACCGACCCTCGTTTGGTCCTCGACCACCCTCACGCTCCAACCAACCTCATGTTCCTCCCCTCCGAGGATAACACCAATCCAGACATCGTTGCCACTTCGGGTGACAACCTTAGGCTTTGGGAAATCCATGATGACCAAATTCAACTAAAGTCTCTTTTAGTTGGTAACAAGGTTAAAGATCACTCGGCCATAACATCTTTCGATTGGGCAGCGTTTGAGGCCCGGTTTGTGGCAACTTGTAGCGTGGACACCACTTGCACCATTTGGGACATAGAGAGGGAAGTCATGAATGCACAACTAGTGGCACATGACAAAGAGGTGTATGATATTTCTTGGGGTGGGTTTAATGTGTTTGCTTCGGTGTCCGGTGATGGTTCTATTAGGGTGTTCGATTTGAGGGATAAGGAGAAATCGACCATAATTTATGAAAACCCGGTGCAGGATAGTCCATTGTTGCGTTTGGAATGGAACAAAGGGGATCCAAGGTTTATGGCAACGGTTGGGATGAATAGCAATAAGGTGGTGATTATGGATATTAGGCAACCAACCACGCCTTACATGGAGTTAAGTAAGCATAAGGCGGGTGTTAATGCCGTATCGTGGTCCCCGGATATCGGACGGCATTTGTGCTCTGCCAGTGACGATTCAACGGCTTTGATTTGGGAGGTGATGGACACGGGGAATATCGGTGGTGGTGGTGGTGTGGAGCCCTTGATGTGGTATGTATCGACGGATGAGATCAATCACGTGCGTTGGTCCCCTGTGCAGTGGGACTGGATTGCCCTCACTTTCATGAATAATTTGCAGCTACTCAAGGTGTAG 1038 0.4971 MDSIEVDFGTQSRGGSQKEQGIHTYVAPWPISSVAWSMRRDKAPRLAIGSYLEEYTNKVELVHFNYDTFNFTTDPRLVLDHPHAPTNLMFLPSEDNTNPDIVATSGDNLRLWEIHDDQIQLKSLLVGNKVKDHSAITSFDWAAFEARFVATCSVDTTCTIWDIEREVMNAQLVAHDKEVYDISWGGFNVFASVSGDGSIRVFDLRDKEKSTIIYENPVQDSPLLRLEWNKGDPRFMATVGMNSNKVVIMDIRQPTTPYMELSKHKAGVNAVSWSPDIGRHLCSASDDSTALIWEVMDTGNIGGGGGVEPLMWYVSTDEINHVRWSPVQWDWIALTFMNNLQLLKV* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2903 345 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 261 295 - -
Dod01g2903 345 PANTHER WD REPEAT CONTAINING PROTEIN 16 345 IPR045159 -
Dod01g2903 345 ProSiteProfiles Trp-Asp (WD) repeats profile. 172 212 IPR001680 GO:0005515
Dod01g2903 345 PANTHER WD REPEAT-CONTAINING PROTEIN LWD1-LIKE 16 345 - -
Dod01g2903 345 ProSiteProfiles Trp-Asp (WD) repeats profile. 261 295 IPR001680 GO:0005515
Dod01g2903 345 Pfam WD domain, G-beta repeat 172 203 IPR001680 GO:0005515
Dod01g2903 345 Pfam WD domain, G-beta repeat 260 293 IPR001680 GO:0005515
Dod01g2903 345 Pfam WD domain, G-beta repeat 131 162 IPR001680 GO:0005515
Dod01g2903 345 Gene3D - 20 342 IPR015943 GO:0005515
Dod01g2903 345 SUPERFAMILY WD40 repeat-like 22 335 IPR036322 GO:0005515
Dod01g2903 345 SMART WD40_4 209 250 IPR001680 GO:0005515
Dod01g2903 345 SMART WD40_4 123 162 IPR001680 GO:0005515
Dod01g2903 345 SMART WD40_4 254 294 IPR001680 GO:0005515
Dod01g2903 345 SMART WD40_4 165 203 IPR001680 GO:0005515
Dod01g2903 345 SMART WD40_4 72 113 IPR001680 GO:0005515
Dod01g2903 345 ProSitePatterns Trp-Asp (WD) repeats signature. 281 295 IPR019775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2903 Dod-Chr1 69465498 69466535 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2903 K11805 - zju:107416321 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2903 01 69465498 69466535 Dod01g2903 01 69465498 69466535 ECH