Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2895 ATGGCTCTATCAAAGTGTCTCACCACCTTTGTGCTGGTGTTATCCCTTAGTGTATTAAATAACTTCGGCGTTGAGGCCTTTCACAAAGTGTACCCGCATCTTCAATCCGTTTCAGCTGTTTCCGTGAGCGAGAAACACAGAACTGGATACCATTTTCAACCTCCTAAGAACTGGATCAATGGACCCATGCACTACAACGGATACTACCATCTCTTCTACCAATACAACCCGAAAGGTTCAGTATGGGGCAACATAGTGTGGGCACACTCAGTCTCAAAGGACCTCATCAACTGGAAAGCACTCGAGCCCGCAATCTACCCATCAAAGCCCTTCGACAAGTTCGGTTGCTGGTCCGGCTCAGCCACCGTCGTCCCCGGCAAAGGACCCGTCATCCTCTACACCGGAATCATCGACGAGAACAACACCCAGGTGCAATGCTACGCCGTACCGGAAGACCTATCCGACCCATTCCTCACAAAATGGGTCAAACCCGACGAGATCAACCCGATCGCCGTCGCGGACAGGGGCGTAAACGGCAGCGCCTTCCGTGACCCAACAACCGCATGGTTCAAGGATGGACACTGGAGGATTTTGGTCGGAAGCAGAAGGAAGCATAGAGGGATGGCCTATTTGTACAGGAGCAAGGATTTCAAGAAGTGGATCCGATCCAAGCACCCGATCCATTCTTCTGCCACAACGGGTATGTGGGAGTGCCCCGATTTTTACCCGGTCTCTTTGAAGGGGACACAAGGTTTGGACACCTCCGTGGTTGGTGGTCACGTGAAGCACGTGCTCAAGAACAGCCTTGACCTCACTAGGTTTGAGTACTACACAGTGGGTACTTATTTCCCTAATAAGGATATGTATGTTCCGGATAACACCTCCGAGGATGGTTGGGGTGGGCTTAGGTATGATTATGGCAACTTCTATGCTTCCAAGTCGTTCTTTGATCCTAGCAAGAACAGGAGGATCTTGTGGGGTTGGGCAAACGAATCTGACACCAGGAATGACGATATTAAGAAGGGATGGGCAGGAATTCAGGCTATTCCAAGAACCTTGTGGCTTGATTCTAACGGGAAACAATTGGTACAATGGCCTGTTGAAGAATTAAACAGTGTTAGAGGGGAACAAGTTAAGATGAGCAATCAAAAGCTTGTGAAGGGAGATAAAGTTGAAGTGCAAGGAATCACTGCTGCTCAGGCAGATGTTGAGGTTACCTTCTCGTTTTCAAGCTTGGACAAGGCAGAGCCGTTTGATCCTAGCTGGGTGAACGCACAGGATCTCTGTGCCCATAAGGGTTCAACCGTTCAAGGTGGGGTTGGACCATTTGGGCTCCTAACTTTGGCTTCACAGAATCTTGAGGAGTTCACCCCCGTGTTCTTCAGAATCTTCAAAGGTCCAAACAAGCACGTGGTACTCTTGTGCAACGATGCTAGCAGTTCCTCTTTGAAGAGTGACTTATACAAGCCATCATTTGCTGGCTTTGTTGACGTGGACTTGTCCAGCAAGAAACTTCCTCTTAGGACTTTGATTGATCATTCCGTAGTGGAGAGCTTTGGAGCAGGAGGGAGAACAAACGTGTTGGCCAGAGTATACCCAGAGCTAGCAGTGACCAGTAACGCTCACTTGTTTGTGTTCAACAATGGGACCGAGCCCATCATTGCGGAGAACCTAGGCGCATGGAGCATGAAATCTGCTGACATAAACTGA 1710 0.4924 MALSKCLTTFVLVLSLSVLNNFGVEAFHKVYPHLQSVSAVSVSEKHRTGYHFQPPKNWINGPMHYNGYYHLFYQYNPKGSVWGNIVWAHSVSKDLINWKALEPAIYPSKPFDKFGCWSGSATVVPGKGPVILYTGIIDENNTQVQCYAVPEDLSDPFLTKWVKPDEINPIAVADRGVNGSAFRDPTTAWFKDGHWRILVGSRRKHRGMAYLYRSKDFKKWIRSKHPIHSSATTGMWECPDFYPVSLKGTQGLDTSVVGGHVKHVLKNSLDLTRFEYYTVGTYFPNKDMYVPDNTSEDGWGGLRYDYGNFYASKSFFDPSKNRRILWGWANESDTRNDDIKKGWAGIQAIPRTLWLDSNGKQLVQWPVEELNSVRGEQVKMSNQKLVKGDKVEVQGITAAQADVEVTFSFSSLDKAEPFDPSWVNAQDLCAHKGSTVQGGVGPFGLLTLASQNLEEFTPVFFRIFKGPNKHVVLLCNDASSSSLKSDLYKPSFAGFVDVDLSSKKLPLRTLIDHSVVESFGAGGRTNVLARVYPELAVTSNAHLFVFNNGTEPIIAENLGAWSMKSADIN* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2895 569 CDD GH32_Fruct1-like 57 355 - -
Dod01g2895 569 Pfam Glycosyl hydrolases family 32 N-terminal domain 51 366 IPR013148 -
Dod01g2895 569 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE PROTEIN 3 568 - -
Dod01g2895 569 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 3 568 - -
Dod01g2895 569 Gene3D - 380 563 - -
Dod01g2895 569 Gene3D Glycosyl hydrolase domain; family 43 56 379 IPR023296 -
Dod01g2895 569 SMART glyco_32 51 523 IPR001362 GO:0004553|GO:0005975
Dod01g2895 569 Pfam Glycosyl hydrolases family 32 C terminal 369 561 IPR013189 -
Dod01g2895 569 SUPERFAMILY Concanavalin A-like lectins/glucanases 366 566 IPR013320 -
Dod01g2895 569 SUPERFAMILY Arabinanase/levansucrase/invertase 41 367 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2895 Dod-Chr1 69396814 69400597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2895 23 563 Glycoside Hydrolase AT2G36190 63.914 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2895 K01193 - gmx:100799008 953.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2895 01 69396814 69400597 Dod01g2895 01 69396814 69400597 ECH