Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2880 ATGGCTCTTCTCTGCAACCCTTCTCTCCCTCTGCAACCGAGAATCCCGGTCCCGATGCCGAGAAAAACTAACAAGCACTCGTCGATTATCACCGACTCCGGCGAGGGAATGAGTAGCAGGCAGCGAACAACTACCTTCTCGCCCTTTGAAGCCCGAATCTCACTCATATTCGCCCTTGCTTCTCAAGCCAGCTCTCTCTCCCAGCGCCTTCTAGCTGACGTGGCTACTGAGACTGCAAAATACGTGTTTCCGAAAAGATTTGAAAGCCGCACCCTTGAGGAGGCACTGATGGCAGTGCCCAACCTTGAGACTGTCCAGTTCAAAGTTCTGAGTAGGAGGGACCAGTATGAGATTAGGGAAGTTGAGCCTTATTTTGTGGCGGAGACTACAATGCCTGGGAAGACTGCCTTTGATTTCAATGGTGCTTCTCGGTCCTTTAATGTCCTAGCTGAGTACCTTTTTGGTAAGAATACAAGGAAGGAGACAATGGAGATGACCACGCCGGTTTTTACAAGCAAGAATCCGTCTGATGGGGTTAAAATGGAGATGACAACTCCTGTGTTAACAGCAAAGACAGAAGATCAAGATAAATGGAAAATGTCATTTGTCATGCCATCAAAGTATGGTGCTGACCTGCCCCTGCCTAAAGACTCATCTGTGAGGATTAAAGAGATTCCCAGAAAAATGGTTGCTGTAGTTTCCTTCTCAGGTTTTGTGAATGATGAAGAAGTTAAGCGGCGGGAACTTAAACTGCAAGAAGCTTTGAAAAGTGACAGACAGTTTAAAATTAAAGAGGGAACTTCGGTAGAAGTTGCACAGTATAATCCACCATTTACTCTTCCGTTTCAACGGCGTAATGAGATTGCATTGGAGGTGGAATGGAAAAATGAGTAG 894 0.462 MALLCNPSLPLQPRIPVPMPRKTNKHSSIITDSGEGMSSRQRTTTFSPFEARISLIFALASQASSLSQRLLADVATETAKYVFPKRFESRTLEEALMAVPNLETVQFKVLSRRDQYEIREVEPYFVAETTMPGKTAFDFNGASRSFNVLAEYLFGKNTRKETMEMTTPVFTSKNPSDGVKMEMTTPVLTAKTEDQDKWKMSFVMPSKYGADLPLPKDSSVRIKEIPRKMVAVVSFSGFVNDEEVKRRELKLQEALKSDRQFKIKEGTSVEVAQYNPPFTLPFQRRNEIALEVEWKNE* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2880 297 Pfam SOUL heme-binding protein 174 290 IPR006917 -
Dod01g2880 297 Pfam SOUL heme-binding protein 102 171 IPR006917 -
Dod01g2880 297 PANTHER HEME-BINDING PROTEIN-RELATED 19 296 IPR006917 -
Dod01g2880 297 MobiDBLite consensus disorder prediction 14 41 - -
Dod01g2880 297 SUPERFAMILY Probable bacterial effector-binding domain 174 292 IPR011256 -
Dod01g2880 297 MobiDBLite consensus disorder prediction 24 41 - -
Dod01g2880 297 Gene3D Regulatory factor, effector binding domain 101 176 IPR011256 -
Dod01g2880 297 Gene3D Regulatory factor, effector binding domain 177 297 IPR011256 -
Dod01g2880 297 PANTHER OS02G0533200 PROTEIN 19 296 - -
Dod01g2880 297 SUPERFAMILY Probable bacterial effector-binding domain 97 176 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2880 Dod-Chr1 69259493 69262384 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2880 - - ccaj:109796809 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2880 01 69259493 69262384 Dod01g2880 01 69259493 69262384 ECH