Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2872 ATGCCTCACAAGACCAACACCATCCTTCCTTCTTCTTCCAGTATGGAGCATCTTCCTGTGGAAGTCATTGGTAATATATTGTCCCGTCTTGGGTCTGCACGTGATGTGGTGATTGCTTCTGCAACTTGCAAGAAATGGAGAGAGGCATGGCGCAATCATTTGCGCACACTCTCCTTCAATTCATGTGACTGGCCACACTACCATGAGTTAACATCTTCTAGGTTGGAAATACTCATCACTCAGACAATCTTTCAGACCAAGGCACTGCAGTGCTTAACCATATTCATGGACGATGAGCACGAGTTTTCCGCGTCCCCTGTCATTGCTTGGCTTATGTACACCAGGGATTCCTTGCGCCAGCTGCGTTATAATGTCAGGACATCCCCCAATTTCAACATCATTGAGAAATGCAGCAGGCAAAGGCTTGAAGTCTTGGCCTTGGCTCGCAATTCTATTACCGGCGTTGAGCCTAGTTACCAGAGATTCCCTTGCTTGAAGTCGCTATCGTTGAGTTTTGTTAGCATCTCCGCCTTGGATCTGAGCCTTCTGCTCTATGCTTGTCCCAAGCTTGAAACCTTGTCCATTGTTAATCCGGAAATTGCCATGTCGGATTCGCAGGCTTCTGTTGAGCTGAGCAGCTCTTCTTTGAAAGATTTCTTTGTTGAGTCGTTCGGTTTGGACAAGTTTATACTGGAGGCGGATTCGCTCGAGAGTCTTCACCTGAAAGATTGTACCTTTGAGGTTTTCGAATTGGTTGGAAAGGGGGCGCTGAAGGTGTTGAAGATTGATGATGTGAGTGTCATCCATCTTGATATTGGAGAGAGTACGGAGAACCTTGAGATTGTTGATGTCTGTAACTTCACGATTATGTGGCCGAAGTTTTATCATATGATCTCGAAAGCATCAAAGTTACATATTCTTAGGCTGTGGGGTGTTGTTTTTGATGATGAGGATGAGGTTGTTGATATAGAGACAATTTCGGTTTGTTTTCCTCGATTGACGCACCTGTCCTTGAGTTATGATTTAAGAGATGGAGTACTTCATTATGGCTTGCAGGGTTTGTCTCCTTTGATGAATGTGGTGGTGTTAGAACTTGGATGGACTGCAATTAGTGATCTCTTCTCTGTGTGGGTAGCTGGACTTTTGGAAAGATGTCCCAATTTGAAAAAGTTGGTCATTTATGGCTTTGTTTCAGAGGTTAAAACACATGAAGAGTGTCAAATTTTTTCCAGATTTACTGAATTCATTCTTCACCTTGGAAGAAAATATATGCATGTAAGGATTGAGTTTGAATATGAGTAG 1302 0.4347 MPHKTNTILPSSSSMEHLPVEVIGNILSRLGSARDVVIASATCKKWREAWRNHLRTLSFNSCDWPHYHELTSSRLEILITQTIFQTKALQCLTIFMDDEHEFSASPVIAWLMYTRDSLRQLRYNVRTSPNFNIIEKCSRQRLEVLALARNSITGVEPSYQRFPCLKSLSLSFVSISALDLSLLLYACPKLETLSIVNPEIAMSDSQASVELSSSSLKDFFVESFGLDKFILEADSLESLHLKDCTFEVFELVGKGALKVLKIDDVSVIHLDIGESTENLEIVDVCNFTIMWPKFYHMISKASKLHILRLWGVVFDDEDEVVDIETISVCFPRLTHLSLSYDLRDGVLHYGLQGLSPLMNVVVLELGWTAISDLFSVWVAGLLERCPNLKKLVIYGFVSEVKTHEECQIFSRFTEFILHLGRKYMHVRIEFEYE* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2872 433 PANTHER F-BOX/LRR-REPEAT PROTEIN 11 431 - -
Dod01g2872 433 SMART fbox_2 18 61 IPR001810 GO:0005515
Dod01g2872 433 Pfam F-box-like 16 51 IPR001810 GO:0005515
Dod01g2872 433 SUPERFAMILY RNI-like 53 395 - -
Dod01g2872 433 Gene3D - 11 57 - -
Dod01g2872 433 PANTHER F-BOX PROTEIN-LIKE 11 431 - -
Dod01g2872 433 SUPERFAMILY F-box domain 9 81 IPR036047 GO:0005515
Dod01g2872 433 Gene3D Ribonuclease Inhibitor 155 413 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2872 Dod-Chr1 69203750 69205626 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2872 - - gmx:100792331 702.205