Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2848 ATGGAGTCAAGCTCAGTCGCAGACGACGACGAACGTGTCATCACCCTGGTTTGCACAAACCCTGATTCTCTTGAAACCGATACTCCGAACGAAGAACAACATGTTCTCTTCTCCACCACACACAACCTCGACTCGGATTTGCTAACTATCCTCAGCTTCCACCACCACACTCTCAAAGTTCACGCTCATCGCAACAGGCTCATTGAACAATCCTCGTACTTTCGTGGCCTCCTCAGCGGGAGCTTTAGTGAATCATACTTAGGAAGTATCACTATCGAGTGGAATGTTGGTGTGTTTATGCAAATTCTCAAGCATATGTATGATTGGCCAGTGGATATTTCCTCCAATAATTTCCTCTCTCTTTACGAGGGCGCACTTTATTTTGGTGTGGAGACACTTATCTTGAAGTGTGAGACGTGGTTTTCTGAGGTATCCTCACCCGAAGGATTTCAGTCAACACAAATACAAGTGGAGGATTTGGTTCAAATTTGGAAGTTTGGCATAGAGCGTGCTAGTGACTTTATTTTGCACTTGTGTGTGGGCTACCTGGCACAAAATTTTATGTGGGCAATGCACAAGAAGTTTTTTGAGAAAATCCCGTATGAACTGCTGTTATCTTCAGTAGAGCACCCTCACTTGACTGTTGACAGTGAGATGCATCTTTCTGATGCACTTCTTCTCTGGCTTGAAAGTAACATGGAAAATTTGGAGAGCCTGAGCAAAGCTGAAGATGACTTCAATGGAATTTTAAAACAGATTCGTGTGGGCCTTTTGCCTATGTGGTTTGCTGCAGGAAAAAGAAACTCTTATCATTTTAGGCAGCTAGCTGAGGAAAGCATTGATTCAATTCTCAGACTATTAAATATTCCACTTATGGGTTCACAAGATATTTTTGAGCATAGTGACTTGCAACATCTCAGGATTCGGCTGACAGAGTACTCAAAGAAAGTGAACCTTTCTGATTGTCCGCAAATAACATCTGCAATACTGCTTCTGTCACTGATCCCTTCATCTGGTACAACAGATCCTACCCAAAAGAAGATTATAGAACAGTTTGTTATTAACTCTGGACATTCTATGAAAGATAGATCTGCATTTCCAAAAAGACTGTTACAAACCTTTACCTTTGAAGCAGTTCAGGAGGTTGATATCTCTAAGTGTCGGGGATTGCTTATTGAACATGCTGTTGATTACTTCTGCAAGTCCTTTCCTTCTTTAAGAATATTGAAAGCAGCTTATCTTTTGAACATCAGGACAATTGGTTTCCTCCAATTGTTGGAGAAGTGCCCTTTGGTCTGTGAAATTGACTTGACTGTTGATATTACTCCACTAATACCGGCATCAGTTACCGTTATATCCTCTAATGCTGCTATGATACCATTGGTACCTGAGAAGACACCTCGTGTTAACCAAAAGCCACTGGAAATCATGATATTTAATAAATCTGGACCTCCACTTTCTAATGTTACAAAACTCACATTGGAAGGAAGAACTGATGTTTGTGATTTGGTTCTCCAGTATATCTCCAAATTCTGTGTTTCATTGTGTCACCTGAATATTAAAGGATGCATTTCCGTCACTGATATTAGCATATCAGATCTCATATGCAGATGTCAGAAACTTAATTCAATTGTGGTTTGTGATACTTCATTTGGGATAAATTCAGTTAAAGCTCTTTCTTCAGCTATTTCTGATATTGGCAACCTTCCCTCTCTACATTCTAGAGACAAGCAGTTGAATCCTATAGCATCTGATCTTCAAACACTGCACATGGGTGGCTGCCGGGGTGTTTGTGAGTCATCTCTACTCGAGCTTATGTCTCAAACACGAGTTTTGAAGAGTTTATGCCTGAGAGGGACTGACCTGGGTGACCAGGCACTGTATAATTTTGTGGGTTCTTCCTTGGAGATGCTAGATGTTTCAGATACCAAGATTTCTGGAGCTGCATTGGCTCATGTTATTCGCGGAAATCCAAGTTTGAAATGCCTTAAAGCAAGAGATTGTATAAATTTGTTTGCAGAGGACAGTTGTATTGAGAAGAGAGAGTCAGTCTTTTCCTCTTTGCATGAAGAACTACAGGCTGAGTTCAGAAATATGTGTAGGTTGGAAGAAATTGAATTTGGATGGGGTTTTTCTGCCATCTCATTCAATGCTCTGGAGTCTGCATTGATGTCATTAAAGACTATCAATATAGGTTTAGGTGGAATGTTAGGTGAAGATGCATTGAGACAATTACCCGCAACCTGTCCCTTGCTAGAAACAATAATCCTTCATTTTCAGGTAATATCTGATACTATTGTGATGAACATTGTTTCATCCTTGGTAAACTTGCAAGTGTTAGCTCTGTGCTATTGTTTTGGTGATATATCCATGGCAAGCTTCAAATTTTCCATGCAAAATCTAAGAAAGTTGAGGCTTGAAAGAGTAACCCCTTGGATGACCAATGATGATTTGGTCATTCTAAGTCAAAACTGCAGAAATTTGGTTGAGCTTTCATTGCTAGGATGTCCCCGTCTTAACTCAGATTCTCAACAGATAATTTCACGTGGATGGCCAGGCTTGGTCTCTATCCATTTAGAGGACTGTGGAGAAGTAACAGCAGATGGGATATCTGCTCTTCTTGACTGCAAAGCTCTTGAAGATCTCCTATTGCGTCATAACGGTTCTGGGCTACAGAGAAACTTCATTTTCAATGCCGCTTCAGAGATGCCATTGCTTCGAAAACTGTCACTGGATATATGTGATGCAAGCGAAGGTGATTTTGACATTCCAGATTATGCAGACAGATGCTTCTTGAGTACCTTGAAGATAGCAAGGTGCAAATCTCAAAGATTTGCATTTAATCTCCCAGCTTGTAAAAGATCTGTGCATGTGGAAACGCTGGTGCTCGTGTGGAACAGTAGAGATCTGATCAGAACAGTCGTGAAAGAGAGGCTGTAG 2940 0.4082 MESSSVADDDERVITLVCTNPDSLETDTPNEEQHVLFSTTHNLDSDLLTILSFHHHTLKVHAHRNRLIEQSSYFRGLLSGSFSESYLGSITIEWNVGVFMQILKHMYDWPVDISSNNFLSLYEGALYFGVETLILKCETWFSEVSSPEGFQSTQIQVEDLVQIWKFGIERASDFILHLCVGYLAQNFMWAMHKKFFEKIPYELLLSSVEHPHLTVDSEMHLSDALLLWLESNMENLESLSKAEDDFNGILKQIRVGLLPMWFAAGKRNSYHFRQLAEESIDSILRLLNIPLMGSQDIFEHSDLQHLRIRLTEYSKKVNLSDCPQITSAILLLSLIPSSGTTDPTQKKIIEQFVINSGHSMKDRSAFPKRLLQTFTFEAVQEVDISKCRGLLIEHAVDYFCKSFPSLRILKAAYLLNIRTIGFLQLLEKCPLVCEIDLTVDITPLIPASVTVISSNAAMIPLVPEKTPRVNQKPLEIMIFNKSGPPLSNVTKLTLEGRTDVCDLVLQYISKFCVSLCHLNIKGCISVTDISISDLICRCQKLNSIVVCDTSFGINSVKALSSAISDIGNLPSLHSRDKQLNPIASDLQTLHMGGCRGVCESSLLELMSQTRVLKSLCLRGTDLGDQALYNFVGSSLEMLDVSDTKISGAALAHVIRGNPSLKCLKARDCINLFAEDSCIEKRESVFSSLHEELQAEFRNMCRLEEIEFGWGFSAISFNALESALMSLKTINIGLGGMLGEDALRQLPATCPLLETIILHFQVISDTIVMNIVSSLVNLQVLALCYCFGDISMASFKFSMQNLRKLRLERVTPWMTNDDLVILSQNCRNLVELSLLGCPRLNSDSQQIISRGWPGLVSIHLEDCGEVTADGISALLDCKALEDLLLRHNGSGLQRNFIFNAASEMPLLRKLSLDICDASEGDFDIPDYADRCFLSTLKIARCKSQRFAFNLPACKRSVHVETLVLVWNSRDLIRTVVKERL* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2848 979 PANTHER UNCHARACTERIZED 64 880 - -
Dod01g2848 979 Gene3D Ribonuclease Inhibitor 571 956 IPR032675 -
Dod01g2848 979 Pfam BTB/POZ domain 57 140 IPR000210 GO:0005515
Dod01g2848 979 ProSiteProfiles BTB domain profile. 45 115 IPR000210 GO:0005515
Dod01g2848 979 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN FBL11 64 880 - -
Dod01g2848 979 SUPERFAMILY RNI-like 691 916 - -
Dod01g2848 979 SUPERFAMILY RNI-like 484 671 - -
Dod01g2848 979 Gene3D Potassium Channel Kv1.1; Chain A 22 182 IPR011333 -
Dod01g2848 979 SMART BTB_4 45 145 IPR000210 GO:0005515
Dod01g2848 979 Pfam BTB And C-terminal Kelch 175 262 IPR011705 -
Dod01g2848 979 CDD BTB_POZ_ZBTB_KLHL-like 59 128 - -
Dod01g2848 979 Gene3D - 183 289 - -
Dod01g2848 979 SUPERFAMILY POZ domain 41 141 IPR011333 -
Dod01g2848 979 Gene3D Ribonuclease Inhibitor 477 570 IPR032675 -
Dod01g2848 979 SMART LRR_CC_2 825 850 IPR006553 -
Dod01g2848 979 SMART LRR_CC_2 749 773 IPR006553 -
Dod01g2848 979 SMART LRR_CC_2 583 608 IPR006553 -
Dod01g2848 979 SMART LRR_CC_2 512 537 IPR006553 -
Dod01g2848 979 SMART LRR_CC_2 798 824 IPR006553 -
Dod01g2848 979 SMART LRR_CC_2 851 876 IPR006553 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2848 - - gmx:100791594 1428.31