Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2845 ATGGTTGGCTTCTCACATTTGAGGCTATACATTTTTTCAGGAAGGAAACATGGAAGACAGGATGCATCATTGACTCCAAAGGAGTTAACCATGAAAGATGAGAATAAGTACATTGATGATGAAGCAGCTAGCACTTACAGTGTGGTTGAGGATGAGCAAGGTTCTGTTCTGTCATCACTTGTAGATGTTAACACCAATGCTCAAGCTGAGAAGACATCAGTGTCTGTAGACAGTAAAGTAAAAATCAAAAGTGAGGAACCTAAACCTAGGATCATTCCCCCACCTGGCACCGGGCAGAAAATATATCAGATTGATTCACTTTTGCAAGCTCACCGTGGACATCTTGATTTCCGCTATGGACAATACAAAAGATTGCGTGAAGAAATTGACAAGTATGAAGGTGGTCTGGATGCATTTTCCCGTGGTTATGAAAAATTTGGCTTCACACGCAGTGCTACGGGAATTACTTTCAGAGAGTGGGCACCTGGAGCAAAGTCAGCAGCGTTAATAGGAGACTTCAACAATTGGAATCCCAATGCAGATGTAATGACTCAGAATGAGTTTGGCGTGTGGGAGATCTTCTTGCCAAACAATGTAGATGGTTCACCGCCAATTCCTCATGGTTCTCGAGTCAAGATCCGCATGGATACTCCCTCTGGAATCAAGGACTCTATCCCTGCTTGGATCAAGTTCTCTGTACAGGCTCCTGGAGAAATTCCGTACAACGGTATATACTATGATCCGCCAGAAGATGAAAAATATGTCTTCAAACATTCACAGCCTAAGAGACCAAAATCACTTAGAATATATGAGACACATGTTGGAATGAGTAGTCCGGAACCAAAAATCAACACATATGTCAATTTTAGAGATGATATGCTACCTCGCATTAAAAGGCTTGGCTATAATGCTGTCCAGATTATGGCTATCCAAGAGCATTCTTATTATGCTAGCTTTGGGTACCATGTTACAAATTTCTTTGCACCTAGCAGTCGGTTTGGAACTCCAGATGAACTTAAGTCTCTGATAGACAAAGCCCATGAACTAGGTCTGCTTGTTCTGATGGATATTGTACATAGCCATGCATCAAATAATACACTGGATGGGCTGAACATGTTTGATGGAACTGATACCCATTACTTTCATGGTGGGTCACGGGGTTATCACTGGATGTGGGATTCTCGCCTTTTTAACTATGGAAGCTGGGAAGTTCTACGATATCTACTTTCCAATGCAAGATGGTGGCTGGATGAATATAAGTTTGATGGGTTTCGTTTTGATGGTGTCACATCAATGATGTATACTCATCATGGATTAGCGGTAGGTTTTACTGGAAATTACAATGAGTACTTTGGTTATACAACTGATGTTGATGCTGTGGTTTACTTGATGCTGGTTAATGATGTCATTCATGGTCTATATCCCGAGGCTGTCACTATTGGTGAAGATGTCAGTGGAATGCCAACGTTCTGCCTTCCAACGCAAGATGGTGGGGTTGGCTTTGATTACCGGCTGCAGATGGCCATAGCAGACAAGTGGATTGAGATTCTCAAGAAGAAAGATGAACACTGGAGAATGGATGATATAATTCACACTCTCACAAACAGAAGGTGGCTGGAAAAATGTGTAGCTTATGCTGAAAGTCATGACCAAGCCTTGGTTGGTGACAAGACAATTGCATTTTGGTTGATGGACAAGGATATGTATGACTTCATGGCTCTAGATAGACCATCTACTCCCCGCATAGATCGTGGGATAGCATTGCACAAAATGATTAGGCTTATTACCATGGGCCTTGGTGGTGAAGGGTATTTGAATTTTATGGGGAATGAATTTGGTCATCCTGAGTGGATTGATTTTCCAAGGGGCGATCAACATCTTCCTAATGGTAAAGCAATTCTTGGGAATAATTACAGTTATGACAAATGTAGGCGTAGATTTGACTTGGGGGACGCAGACTATCTAAGATACCGAGGGATGCAAGAATTTGATCAGGCCATGCAGCATCTAGAAGAAAGGTTTGGTTTCATGACTTCTGAGCACCAATATATTTCTCGGAAAAATGAAGGTGATCGGGTTATAGTCTTTGAAAGGGGCAGCCTTGTCTTTGTATTCAATTTTCATTGGACCAACAGCTATTCAGATTACAGAGTTGGATGCTTAACCCCAGGGAAGTATAAGATTGTCTTCGATTCAGATGATGCCTTGTTTGGTGGCTTCAGTAGGCTCAATCACGCTGCCGAGTATTTCACCGCTGATGGATGGTATGATGACAGACCTCGATCCTTTCTCGTGTATGCACCTTCTAGAACAGCAGTGGTCTATGCACTTGCGGATGAAGTTGAACCAGAGCCAGAGCCAGAGCCGGAGCCACAGCCAGAGCCAGTTGAACCCTGA 2397 0.4272 MVGFSHLRLYIFSGRKHGRQDASLTPKELTMKDENKYIDDEAASTYSVVEDEQGSVLSSLVDVNTNAQAEKTSVSVDSKVKIKSEEPKPRIIPPPGTGQKIYQIDSLLQAHRGHLDFRYGQYKRLREEIDKYEGGLDAFSRGYEKFGFTRSATGITFREWAPGAKSAALIGDFNNWNPNADVMTQNEFGVWEIFLPNNVDGSPPIPHGSRVKIRMDTPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPEDEKYVFKHSQPKRPKSLRIYETHVGMSSPEPKINTYVNFRDDMLPRIKRLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPDELKSLIDKAHELGLLVLMDIVHSHASNNTLDGLNMFDGTDTHYFHGGSRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLDEYKFDGFRFDGVTSMMYTHHGLAVGFTGNYNEYFGYTTDVDAVVYLMLVNDVIHGLYPEAVTIGEDVSGMPTFCLPTQDGGVGFDYRLQMAIADKWIEILKKKDEHWRMDDIIHTLTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRGDQHLPNGKAILGNNYSYDKCRRRFDLGDADYLRYRGMQEFDQAMQHLEERFGFMTSEHQYISRKNEGDRVIVFERGSLVFVFNFHWTNSYSDYRVGCLTPGKYKIVFDSDDALFGGFSRLNHAAEYFTADGWYDDRPRSFLVYAPSRTAVVYALADEVEPEPEPEPEPQPEPVEP* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2845 798 Gene3D Glycosidases 105 674 - -
Dod01g2845 798 Gene3D - 679 784 IPR013780 -
Dod01g2845 798 Gene3D Immunoglobulins 141 253 IPR013783 -
Dod01g2845 798 SMART aamy 284 644 IPR006047 GO:0005975
Dod01g2845 798 SUPERFAMILY E set domains 139 248 IPR014756 -
Dod01g2845 798 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 64 781 IPR037439 GO:0003844|GO:0005978
Dod01g2845 798 MobiDBLite consensus disorder prediction 781 798 - -
Dod01g2845 798 CDD AmyAc_bac_euk_BE 250 665 - -
Dod01g2845 798 Pfam Alpha amylase, catalytic domain 294 366 IPR006047 GO:0005975
Dod01g2845 798 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 2-1, CHLOROPLASTIC/AMYLOPLASTIC 64 781 - -
Dod01g2845 798 Pfam Alpha amylase, C-terminal all-beta domain 683 776 IPR006048 GO:0003824|GO:0005975|GO:0043169
Dod01g2845 798 SUPERFAMILY (Trans)glycosidases 258 672 IPR017853 -
Dod01g2845 798 SUPERFAMILY Glycosyl hydrolase domain 679 778 - -
Dod01g2845 798 MobiDBLite consensus disorder prediction 779 798 - -
Dod01g2845 798 CDD E_set_GBE_euk_N 153 246 - -
Dod01g2845 798 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 145 228 IPR004193 GO:0004553|GO:0005975
Dod01g2845 798 PIRSF GlgB 31 786 IPR037439 GO:0003844|GO:0005978
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2845 Dod-Chr1 68730974 68752816 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2845 11 779 Glycoside Hydrolase AT5G03650 78.627 0.0 1279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2845 K00700 - gmx:100785968 1421.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2845 01 68730974 68752816 Dod01g2845 01 68730974 68752816 ECH