Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2835 ATGTCTTGTATCACTCACCACCGCCAATTCCTACTCATTCTCGTTCTCTCCCTTCACACAGCAACGTTCACGACATGCTCCTCATCCACCCCACGAGAGCTCCTCAGAGGCTTCTCCGCCTCACCGCAATCCACAAGGGCGTCGTTTGAGGCCCTTCTGAGAGACCCAACCGGCAACTTCTCCCTGGGCTTCCTCCGCCAGGACCAAAACCAGCTCGCACTAGCCGTCATCCACGTGGCATCATCACAGCCACTCTGGTTCGCCAACCCAACCCAATTAGCCTCGTGGTCCCACACCACGCGCCTCTCATTCAACGGCAGCCTCGTCCTCTCCGACTCCAAAACGAACCTCTTCTGGTCAACCGCCACAAATAACGGCGACACTCTCATCCTCCTCAACACTTCCAACTTGCAGGTCCAAAACAAAGACACTCCCACGCCCCTATGGCAAAGCTTCGATTTCCCCACAACTACGCTCGTACAGGACCAGAACTACACAACGGGAATGTCCTTGTCGTCGCAAAACGGCCTCTACTCGTTGCGGTTAGGCAGCGACTTCATGGGCCTTTACGCCAACTACCCCGAAAAAGACGGAGGAGGTTCGTTGAGGCAGTTACTGTACTGGAAACACACCGCACTGGAAGCCAAAGCAGAGGTAAAACAAGGTCAGGGGCCCATTTACGCACGTGTCAATAAGGAGGGCTATCTCGCCATGTACCAGACGAGCGCGAAGCCCGTGGACGTTCAGAAGTTCGACAGCTTCCAGCAGGCCGTAACGGCTTCGTCGTTTCTGTTGGTGCGGTTGGAACCGGACGGGAACCTGAGAGGGTATTACTGGGACGGGGACAAGTTCACGTGGGTGCTCAACTACCAGGCCATAACGGAAACGTGTGAGCTCCCCAGTCCCTGCGGTTCGTACGGTTTGTGCACGCCGGGCGGGTCCGGGTGCTCGTGTTTGGATAACCGGACCCGGTTCGAAGCGGGTGGGTGTTTGGGTGGAAATGATGATGGTGATAGTGGGGGGGACTTGTGTGGGGAAAAGATGGGTGGAGGCAGTTACTGGGTGCTGAGGAAGACGGGGGTGGAGCCACCGCACAAGGAGCTACTGGACCACGTGAGGACGTCGTCTTTGTCGGAGTGCGAGGGTTTGTGCGAGAGAAACTGCAGTTGCTGGGGAGCGCTGTATAACAACGGGACCGGGTTTTGTTACGTTTTGGATTACCCGATCCAGACCACGGTGGGTACCGGGGATGAGTCCAAGGTGGGGTATTTTAAGGTGAGGAAGAGTGCGGGTGGGAGCAGCCGCGTTCGGGTTCGGGTTGGGGTGGTGGTTGGGGTTCTGGTTGGGATTGTTGCTGTTGGGGTCGCTGGGATTTGCGTGATGAGAATGAGACGGAGAAGGAAAGGGGTGAGTGGGATGCTGAGTGAGGAAAACGGGGCTTCGCCCGGCCCGTACAAGAATCTCGGATCGGCTAGCTTCAAATCCATCGAGATGAGCAGTGGGCGACAGGGAGTGTTGAGATGA 1524 0.5682 MSCITHHRQFLLILVLSLHTATFTTCSSSTPRELLRGFSASPQSTRASFEALLRDPTGNFSLGFLRQDQNQLALAVIHVASSQPLWFANPTQLASWSHTTRLSFNGSLVLSDSKTNLFWSTATNNGDTLILLNTSNLQVQNKDTPTPLWQSFDFPTTTLVQDQNYTTGMSLSSQNGLYSLRLGSDFMGLYANYPEKDGGGSLRQLLYWKHTALEAKAEVKQGQGPIYARVNKEGYLAMYQTSAKPVDVQKFDSFQQAVTASSFLLVRLEPDGNLRGYYWDGDKFTWVLNYQAITETCELPSPCGSYGLCTPGGSGCSCLDNRTRFEAGGCLGGNDDGDSGGDLCGEKMGGGSYWVLRKTGVEPPHKELLDHVRTSSLSECEGLCERNCSCWGALYNNGTGFCYVLDYPIQTTVGTGDESKVGYFKVRKSAGGSSRVRVRVGVVVGVLVGIVAVGVAGICVMRMRRRRKGVSGMLSEENGASPGPYKNLGSASFKSIEMSSGRQGVLR* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2835 507 Gene3D - 42 153 IPR036426 -
Dod01g2835 507 PANTHER - 35 490 - -
Dod01g2835 507 Pfam D-mannose binding lectin 86 169 IPR001480 -
Dod01g2835 507 Pfam S-locus glycoprotein domain 259 320 IPR000858 GO:0048544
Dod01g2835 507 SMART blect_4 37 155 IPR001480 -
Dod01g2835 507 ProSiteProfiles Bulb-type lectin domain profile. 37 152 IPR001480 -
Dod01g2835 507 ProSiteProfiles PAN/Apple domain profile. 344 428 IPR003609 -
Dod01g2835 507 PANTHER OS11G0149900 PROTEIN 35 490 - -
Dod01g2835 507 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 287 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2835 Dod-Chr1 68561909 68564681 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2835 - - cam:101498584 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2835 01 68561909 68564681 Dod01g2835 01 68561909 68564681 ECH