Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2822 ATGGATCGGCTTTCTTCGGCCACTGTTATTCCTGACGCGTTTCAAGGGGCAAAAGATGACTTAACCATGCAGCTTGCATTCATCTGGGGCCAAATCAAGGCGCCATTGATCGTGCCGCTGCTGAGAATATCAGTGTTCCTGTGCTTGATCATGTCGGTGATGATGTTCATCGAGAGGATGTACATGGGCATTGTCATCACCTTGGTGAAGTTGTTTGGGAGAAAGCCAGAGAAGCGTTTCAAGTGGGAGCCAATGAAGGACGACGTTGAGTTGGGCAACTCTTCTTACCCAGTGGTTCTCGTTCAAATCCCCATGTACAACGAAAGAGAGGTTTATCAGCTGTCAATTGGAGCTGCATGTGGACTTTCTTGGCCTTCAGATAGGATCATCGTGCAAGTTCTTGATGACTCCACTGACCCAACAATCAAGGAGTTGGTGCAGCTGGAATGCCAAAGATGGGCGAGCAAAGGGGTGAACATAAAGTATGAGGTTAGGGACAACAGGAATGGGTACAAAGCTGGGGCTCTCAAAGAAGGCATGAAGCGAAGCTACGTGAAGCTATGCGATTTCGTTGCTATTTTTGACGCTGATTTCCAGCCAGAACCTGATTTCTTGTGGCGCACGGTCCCTTTCCTCGCCCACAATCCTGAACTCGCCCTCATTCAGGCTCGCTGGAAATTTGTGAATTCCGATGAATGTTTGATGACCAGGATGCAAGAGATGTCACTGGATTACCATTTTACTGTAGAACAAGAAGTGGGGTCTTCCACTTACGCTTTCTTTGGTTTCAACGGGACTGCGGGAGTGTGGAGAATTGCGGCGCTGAATGAGGCTGGTGGGTGGAAGGATAGGACCACAGTGGAAGATATGGACCTGGCTGTCCGAGCCAGTCTCAAAGGATGGAAATTCTTATACTTGGCCAACTTGAAGGTTAAAAATGAGTTGCCAAGTACTTTCAAGGCCTACCGCTACCAACAGCACCGATGGTCTTGTGGGCCAGCCAATCTTTTCAGGAAAATGGTCATGGAGATTATCAAAAACAAGAAAGTGTCATTGTGGAAGAAGATACATGTCATATACAGCTTCTTCTTTGTTCGGAAGGTTGTAGCCCACATCAACACGTTTGTGTTTTATTGTATTGTATTGCCTGCAACAGTTTTGGTGCCTGAGGTTGCGGTCCCAAAGTGGGGTGCTGTGTATATCCCCTCTGTCATCACCATTCTAAATGCAGTTGGAACTCCAAGGTCACTCCATTTACTTGTTTTTTGGATTCTCTTTGAGAATGTCATGTCTCTACATCGAACAAAGGCAACAATCATTGGTCTACTAGAGGCTAGTCGAGTGAATGAATGGGTTGTCACTGAAAAACTTGGAGATGCTCTCAAGACTAAAGCAGGAGCTAAAGCACCCAATAAGAAGCCTCGATTCAGGATTGGAGACAGGATTCACTTGTTAGAACTTGGTGTTGGATTCTACCTCTTCTTCGTTGGCTGCTATGATGTTATGTTCGGGAAAAACCACTTCTTCATCTTCCTTTTCATCCAAGCATTTGCCTTCTTCATCATGGCATTTGGATATGTTGGTACCTTTGTTCCCAACTCCTAG 1605 0.4611 MDRLSSATVIPDAFQGAKDDLTMQLAFIWGQIKAPLIVPLLRISVFLCLIMSVMMFIERMYMGIVITLVKLFGRKPEKRFKWEPMKDDVELGNSSYPVVLVQIPMYNEREVYQLSIGAACGLSWPSDRIIVQVLDDSTDPTIKELVQLECQRWASKGVNIKYEVRDNRNGYKAGALKEGMKRSYVKLCDFVAIFDADFQPEPDFLWRTVPFLAHNPELALIQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRIAALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLANLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMVMEIIKNKKVSLWKKIHVIYSFFFVRKVVAHINTFVFYCIVLPATVLVPEVAVPKWGAVYIPSVITILNAVGTPRSLHLLVFWILFENVMSLHRTKATIIGLLEASRVNEWVVTEKLGDALKTKAGAKAPNKKPRFRIGDRIHLLELGVGFYLFFVGCYDVMFGKNHFFIFLFIQAFAFFIMAFGYVGTFVPNS* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2822 534 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9-LIKE 1 533 - -
Dod01g2822 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 312 IPR029044 -
Dod01g2822 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 373 IPR029044 -
Dod01g2822 534 CDD CESA_CaSu_A2 97 333 - -
Dod01g2822 534 Pfam Glycosyltransferase like family 2 99 332 - -
Dod01g2822 534 PANTHER - 1 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2822 Dod-Chr1 68432747 68438675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2822 1 533 Miscellaneous Gene Families AT5G03760 80.488 0.0 937
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2822 K13680 - gmx:100810016 1012.29