Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2816 ATGCATTCGGGTCACTTGCTTCTCGAGGAACCCATTCGGATGGTTTCCATCCTCGAACCATCCAAGCCCAGCTTCTTCCGTGCAATGACGAAGATTGTTGGCACCCTTGGTCCTAAATCTCGCTCTCCCGACGTTATTTCTGCCTGCCTCGAAGCCGGAATGTCTGTGGCTCGTTTCGATTTCTCATGGGGTGATCCCGAGTATCACCAGGAGACTCTCAGGAATTTGAAGACTGCCATCAGAATCACCAACAAGCTCTGTGCTGTTATGCTTGACACGGTTGGAGCGGAGATGCAGGTTGTTAACAAGAGTGAGAAATCTATCTCGCTTCAGGTGGACGGTCTCGTTGTTCTAACTCCTGACCAGGGACAAGAGGCCTCTTCACAGATGCTCCCTATCAATTTTGATGGACTAGCCAAGTCTGTGAAGAAGGGGGACACAATTTTTGTTGGTCAATACTTGTTCACAGGGAGTGAAACCACTTCTGTATGGCTAGAGGTGGCTGAAGTCAAAGGGCAGGATGTCGTTTGTACTATAAAGAATTCAGCAACATTGGCTGGGTCATTGTTCACTTTGCATGCCTCTCAAATTCATCTTGATTTGCCTACCCTCTCTGAGAAAGACAAGGAGGTTATAAGCACCTGGGGAGTAAAAAACAAAATTGATTTTCTTTCATTGTCATATACTAGGCATGCTGAAGATGTTCGCCAGGCCCGTGAACTTCTTTCTAAGTTTGGTGATCTCAGCCAGACTCAAATTTTTGCGAAGATTGAAAATGTTGAGGGATTGGCCCATTTTGATGAGATTCTTCAAGAAGCAGATGGCATTATCCTTTCCCGTGGGAATTTGGGCATTGATCTTCCACCAGAGAAGGTATTTTTCTTTCAAAAATCTGCCCTTTACAAGTGTAATATGGCTGGGAAACCTGCTGTGCTTACACGTGTTGTGGATAGCATGACTGACAACTTAAGACCAACTCGAGCAGAAGCCACTGATGTTGCCAATGCTGTTTTAGATGGAAGTGATGCAATACTTTTGGGTGCTGAGACTTTACGTGGGTTATACCCTGTTGAGACTATCTCTACTGTAGGAAAAATTTGTTCAGAGGCTGAGAAAGTTTTCAATCAGGACCTTTATTTTAAGAAGACAGTCAAACATGTTGGAGAGCCTATGACCCATTTGGAATCTATTGCATCCTCTGCGGTAAGAGCAGCTATTAAGGTGAAGGCTTCTGTTATCATATGCTTCACTTCATCTGGAAGGGCTGCAAGATTGATAGCAAAGTATAGGCCAACAATGCCAGTTATCTCCGTTGTGATTCCCCGAATTATGACAAATCAGCTAAAATGGAACTTTAGTGGAGCTTTTGAGGACCAACTACCAACTCATTTTTGGGAAAGCTTATCTACAACTGCAAGGCAATCTCTTATTGCAAGAGGCCTCTTTCCAATGCTTGCTGTTGCTGATCCCGGACATCCTGCTGAGTCAACAAGTGCAACAAATGAGTCTATTCTCAAGCTTGCCCTTGATTATGGGAAAGCATCAGGAGTTATAAAGTCACATGATCGAGCTGTTGTTTGCCAGAAAGTTGGGGATGCATCTGTGGTTAAGATTATCGAGCTTGAAGATTAA 1632 0.4418 MHSGHLLLEEPIRMVSILEPSKPSFFRAMTKIVGTLGPKSRSPDVISACLEAGMSVARFDFSWGDPEYHQETLRNLKTAIRITNKLCAVMLDTVGAEMQVVNKSEKSISLQVDGLVVLTPDQGQEASSQMLPINFDGLAKSVKKGDTIFVGQYLFTGSETTSVWLEVAEVKGQDVVCTIKNSATLAGSLFTLHASQIHLDLPTLSEKDKEVISTWGVKNKIDFLSLSYTRHAEDVRQARELLSKFGDLSQTQIFAKIENVEGLAHFDEILQEADGIILSRGNLGIDLPPEKVFFFQKSALYKCNMAGKPAVLTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGKICSEAEKVFNQDLYFKKTVKHVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVISVVIPRIMTNQLKWNFSGAFEDQLPTHFWESLSTTARQSLIARGLFPMLAVADPGHPAESTSATNESILKLALDYGKASGVIKSHDRAVVCQKVGDASVVKIIELED* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2816 543 Gene3D - 97 201 IPR015806 GO:0004743|GO:0006096
Dod01g2816 543 PRINTS Pyruvate kinase family signature 221 235 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod01g2816 543 PRINTS Pyruvate kinase family signature 253 279 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod01g2816 543 PRINTS Pyruvate kinase family signature 280 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod01g2816 543 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod01g2816 543 PRINTS Pyruvate kinase family signature 348 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod01g2816 543 PRINTS Pyruvate kinase family signature 329 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod01g2816 543 Gene3D - 363 541 IPR036918 -
Dod01g2816 543 Pfam Pyruvate kinase, alpha/beta domain 395 538 IPR015795 -
Dod01g2816 543 Pfam Pyruvate kinase, barrel domain 30 375 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod01g2816 543 TIGRFAM pyruv_kin: pyruvate kinase 30 448 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod01g2816 543 SUPERFAMILY PK beta-barrel domain-like 103 186 IPR011037 -
Dod01g2816 543 PANTHER PYRUVATE KINASE 2 543 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod01g2816 543 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 6 375 IPR015813 GO:0003824
Dod01g2816 543 Gene3D - 30 362 IPR040442 -
Dod01g2816 543 PANTHER PYRUVATE KINASE 2 543 - -
Dod01g2816 543 SUPERFAMILY PK C-terminal domain-like 358 535 IPR036918 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2816 Dod-Chr1 68322740 68330644 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2816 K00873 - gmx:100781158 976.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2816 01 68322740 68330644 Dod07g0187 07 2402437 2410610 PCT