Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2805 ATGGACGCTCCTCGCAAACACCAGGTATCGTTGAGAGGAGCAAGTGCAAAGGAGATAACAAGGGATGCCCTTCTGGAGAAGGTCTCCAGGGAACGAGAGCTTCGCAATTATGCTAAGCGTGCTGCTGCTGCTGCTCTCTTTATTCAGAGAGTATGGAGGCGCTATAAGGTCACAAGGATGGTTGCTCTGCAGCTTCAGCAGGAGTGGGAGATATTGGTGAATAATTACACTGGTGCAATGACAGCCATTTGGATTTCAAACAATTTGTTGAGACCATTTCTTTTCTTTATAACCCGGTTCTCAACACGGCATCAGAAATTCTACAGCAAGAGAATAGGCTCCATGAAGATTTGCTTTACAATCCTATTGGAAACTATGAAATCTTCAGAGTTTACTGAATGCAATTCAGGTGATCAAGATATGCTTATTGTGACATCCCTAGCAATGCGCATCCTTGTCATGTTAACTGATGTGAAAGGATGGAAAGGCATGGCTGATGATGGCCGTCTAGATGCAGATTTAGCAGTGAGAGACTTAATTCAGTTCATGGGGAGTGATAAAAGTGGGAGTTATGCTTGTATTGCCAGGTATATAAGTGCATTGGATAATCATTCTTCGCAGACAAAAAGTATCACTCAGGGAGATGAACAATTTTTTATTACTGCAAGTGCAATAACTTTAGCTTTGCGGCCATTTTGTCTGACGAGCATCGATGTAAAAGGGCCTGATATGCTGGATGTCAACCATGCTGCTAAGCAGTATATTGTATATGTACTGACTATTCCTTGGCTTGTGCAACATCTCCCACCTGTTCTTCAACCTGTTTTAAGGCACAAATCAATTTTATTCCCATGTTTCCAGACTGTATTGATTTTGAAAGAGAATATTTTAATGGAGATGTCAATGTTGGTCCAGTCAGACTTTCTTGTCTCTTTCAAGGCAATGCCACCTGTTGGTTGGGCTCTTGCTAACACTATATGCCTAGCAACTGGGAATGAGAAGGATCCTGTGAACTCTGGATCCTTGAATCAAGGTTTAGACTATACATCTTACGTCCATGTTGTGATTGCTTTAGCAGAAAGCCTACTGGCTCATCTTGATAATATTGGATGGATTACAAAGAAGAAGAAAGCCCTTCAAACTGATGTTGAAACTTCAACACAGCCAGTTGATACAGTTCTGCATGAGGATGAACCAACCTATGAGTCATTAACAGTGGCATACATGGATCAGTTTAGGCCTGTTTGCCAGCAGTGGCATCTTACAAAACTTCTGGCATCAGTAAATAGAGATTCCTCTGAGACAGTTGAGACTCCACTCTCAAATAGTTTGGATTGTTTGAGGAAGCTAGATTTGTGTGATATTGCACTCTTTTATTCTAACTTGCTTAGAATATTTTCAACCCTGTGTCCAATTCGTGGCTCATTTCCAGTTCTCAATATGCTGTCCTTCAACCCTGAATTTATTGTCAGACTGTGGAGTGTACTGGAGGGTTCCTTTTTTTCTGGAGATAAACATATATCTGACTATCACACAGGTGAAAACAGTAAAAATAAATCTTTGGAGAAGATGCAAAAACAGATGAGTAAAGACAGGGCTAATAGGTGGGTGAGTGTTGTTCACAAATTTACAGGTAAGTCACAAGCTGCAAGGGATTCTACAGATCCCATTGGCAGTCACTCTGAGCCTAGCAGAGTGAATGAGGATTCGTCAGATGTGTGGGACGTAAAACCTATGAGGCATGGCCCACAAGGCATTCCAAAGGATATGTTTGCTGTGCTTCATCTTTTCTGTGCAACCTATTCTCACCTGCTTTCAGTTCTTGACGACATAGAGTTCTATGAGAAACAGGTTCCTTTCAAATTAGAGCAGCAACGAAGAATCGCATCAATGCTAAATACCCTAGTGTATAATGGCTTGTCCCATGTTAGTGGTCATCATAATAAACCCCTCATGGATTACGCTGTCAGATGCTTACATTTAATGTATGAAAGGGATTGCAGACACCCATTTTGTCCTCCTGATTTGTGGCTTTCTCCTGCTAGAAAAAGCCGGCCGCCAATTGCATTTGCTGCGAGAACCCATGAAGTTTTATCAGCCAACCTAAGATCTGATGATTCATCAGCTGCCCTGAGTGTAGGTTCTGTTATCACCATGACTCCTCATGTTTTCCCTTTTGAAGAGAGAGTTGAGATGTTTCGTGAATTCGTCAAGATGGATAAGGCCTCCCGGAAAATGGCTGGTGAAATTTCTGAACCTGGTTCACGAGCAATTGAGATAGTAGTAAGACGGGGTCATATCGTTGAAGATGGATTCAGACAATTAAATTCCCTTGGATCAAGGTTGAAGTCATCTGTTCATGTATCATTTGTCAGTGAATGCGGCCTTCCGGAGGCTGGCCTGGACTACGGTGGATTGTCTAAAGAGTTTTTAACTGACATATCAAAAGCAGCCTTTGCCCCTGAATATGGATTATTTTCCCAAACCTCAACTTCAGACAGGCTTCTGATTCCAACTGCTTCTGCAAGATATTTGGAGAATGGTCTTCAAATGATTGAGTTCCTTGGAAGAGTAGTTGGTAAAGCTCTTTATGAAGGAATATTACTTGATTACTCCTTCTCACATGTTTTTGTACAAAAGCTATTGGGACGATATAGCTTTCTTGATGACTTATCAACACTTGATCCAGAGCTATACAGGAATCTGATGTATGTCAAGAATTATGATGGTGATATCAAGGACCTCTCTCTTGATTTCACAGTTACTGAAGAATCATTTGGCAAAAGAAACATGGTTGAGCTAAAGTCTGGTGGCAAAGATATTTCTGTGACAAATGAGAATAAGATGCAGTACATACATGCAATGGCACACTACAAACTCAACCAACAGATATTACCCTTTTCAAATGCATTTTATAGAGGATTAACCGATCTTATATCTCCATCCTGGTTGAAGTTATTCAATGCTAGTGAATTTAATCAGTTGCTTTCAGGTGGCAATTACGATATTGATATTGATGATTTGAAAAATAACACGCGGTACACTGGTGGTTACAATGAGGGAAGCCGAACAATCAAGATTTTTTGGGAGGTGGTTAAAGGCTTTGAACCAAAGGAGCGTTGTATGCTTCTTAAATTTGTCACCAGTTGTTCTCGTGCTCCATTACTTGGGTTCAAATACTTGCAGCCAACGTTTACAATCCACAAGGTTGCATGTGATGTCCCTCTTTGGGCAACATTTGGAGGACAAGATGTAGACCGGCTTCCATCAGCTTCAACTTGCTACAATACTCTTAAGCTTCCAACGTACAAACGTCCTGGCACTTTGAGAATGAAGCTGCTATATGCTATCAGTTCAAATGCTGGATTTGAACTTTCTTGA 3381 0.4105 MDAPRKHQVSLRGASAKEITRDALLEKVSRERELRNYAKRAAAAALFIQRVWRRYKVTRMVALQLQQEWEILVNNYTGAMTAIWISNNLLRPFLFFITRFSTRHQKFYSKRIGSMKICFTILLETMKSSEFTECNSGDQDMLIVTSLAMRILVMLTDVKGWKGMADDGRLDADLAVRDLIQFMGSDKSGSYACIARYISALDNHSSQTKSITQGDEQFFITASAITLALRPFCLTSIDVKGPDMLDVNHAAKQYIVYVLTIPWLVQHLPPVLQPVLRHKSILFPCFQTVLILKENILMEMSMLVQSDFLVSFKAMPPVGWALANTICLATGNEKDPVNSGSLNQGLDYTSYVHVVIALAESLLAHLDNIGWITKKKKALQTDVETSTQPVDTVLHEDEPTYESLTVAYMDQFRPVCQQWHLTKLLASVNRDSSETVETPLSNSLDCLRKLDLCDIALFYSNLLRIFSTLCPIRGSFPVLNMLSFNPEFIVRLWSVLEGSFFSGDKHISDYHTGENSKNKSLEKMQKQMSKDRANRWVSVVHKFTGKSQAARDSTDPIGSHSEPSRVNEDSSDVWDVKPMRHGPQGIPKDMFAVLHLFCATYSHLLSVLDDIEFYEKQVPFKLEQQRRIASMLNTLVYNGLSHVSGHHNKPLMDYAVRCLHLMYERDCRHPFCPPDLWLSPARKSRPPIAFAARTHEVLSANLRSDDSSAALSVGSVITMTPHVFPFEERVEMFREFVKMDKASRKMAGEISEPGSRAIEIVVRRGHIVEDGFRQLNSLGSRLKSSVHVSFVSECGLPEAGLDYGGLSKEFLTDISKAAFAPEYGLFSQTSTSDRLLIPTASARYLENGLQMIEFLGRVVGKALYEGILLDYSFSHVFVQKLLGRYSFLDDLSTLDPELYRNLMYVKNYDGDIKDLSLDFTVTEESFGKRNMVELKSGGKDISVTNENKMQYIHAMAHYKLNQQILPFSNAFYRGLTDLISPSWLKLFNASEFNQLLSGGNYDIDIDDLKNNTRYTGGYNEGSRTIKIFWEVVKGFEPKERCMLLKFVTSCSRAPLLGFKYLQPTFTIHKVACDVPLWATFGGQDVDRLPSASTCYNTLKLPTYKRPGTLRMKLLYAISSNAGFELS* 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2805 1126 Gene3D Hect, E3 ligase catalytic domains 760 998 - -
Dod01g2805 1126 CDD HECTc 758 1124 IPR000569 GO:0004842
Dod01g2805 1126 MobiDBLite consensus disorder prediction 545 573 - -
Dod01g2805 1126 SUPERFAMILY Hect, E3 ligase catalytic domain 758 1119 IPR035983 GO:0004842
Dod01g2805 1126 MobiDBLite consensus disorder prediction 547 564 - -
Dod01g2805 1126 SMART hect_3 776 1126 IPR000569 GO:0004842
Dod01g2805 1126 Gene3D Hect, E3 ligase catalytic domain 1001 1125 - -
Dod01g2805 1126 Pfam HECT-domain (ubiquitin-transferase) 813 1126 IPR000569 GO:0004842
Dod01g2805 1126 Gene3D Hect, E3 ligase catalytic domain 884 963 - -
Dod01g2805 1126 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 3 1126 IPR044611 GO:0000209|GO:0061630
Dod01g2805 1126 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 3 1126 - -
Dod01g2805 1126 ProSiteProfiles HECT domain profile. 782 1126 IPR000569 GO:0004842
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2805 Dod-Chr1 68161239 68171022 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2805 K10588 - gmx:100527169 1868.2